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Series GSE155487 Query DataSets for GSE155487
Status Public on Sep 25, 2020
Title Next Generation Sequencing of Wild Type (Col-0) , LNJ overexpressor and jazD Transcriptomes in Arabidopsis thaliana
Organism Arabidopsis thaliana
Experiment type Expression profiling by high throughput sequencing
Summary Plants were grown for 21 days under LD conditions and RNA was extracted and sequenced
 
Overall design Examination of three genotypes (wild type/ LNJ-OX / jazD) and one condition with two replicates each
 
Contributor(s) Wenkel S, Sun B
Citation(s) 33033229
Submission date Jul 31, 2020
Last update date Nov 23, 2022
Contact name Bin Sun
E-mail(s) SunBin0909@hotmail.com
Organization name Copenhagen Plant Science Centre – University of Copenhagen
Department Department of Plant and Environmental Sciences
Lab Stephan Wenkel's Lab
Street address Thorvaldsensvej 40
City Frederiksberg C
ZIP/Postal code 1871
Country Denmark
 
Platforms (1)
GPL13222 Illumina HiSeq 2000 (Arabidopsis thaliana)
Samples (6)
GSM4705181 Col-0 rep1
GSM4705182 Col-0 rep2
GSM4705183 LNJ-ox rep1
Relations
BioProject PRJNA649933
SRA SRP274566

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE155487_DEGs_tables_limma-voom_JAZD-WT.tabular.txt.gz 1.0 Mb (ftp)(http) TXT
GSE155487_DEGs_tables_limma-voom_LNJox-WT.tabular.txt.gz 1.1 Mb (ftp)(http) TXT
GSE155487_RAW.tar 750.0 Kb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file
Processed data are available on Series record

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