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| Status |
Public on Apr 01, 2010 |
| Title |
SNP chip data of EWS |
| Organism |
Homo sapiens |
| Experiment type |
Genome variation profiling by SNP array
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| Summary |
Ewing sarcoma is one of the solid tumor that developed in children. We performed SNP-chip analysis against 27 specimens of Ewing sarcoma using Affymetrix GeneChip and CNAG/AsCNAR software. Our study revealed the detailed profile of copy number alterations in Ewing sarcoma.
Keywords: SNP-chip
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| Overall design |
To identify oncogenic lesions in Ewing sarcoma, we performed a genome-wide analysis of Ewing sarcoma samples using high-density SNP arrays (Affymetrix GeneChip).
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| Contributor(s) |
Takita J, Chen Y, Kato M, Ohki K, Sanada M, Igarashi T, Hayashi Y, Ogawa S, Nishimura R |
| Citation missing |
Has this study been published? Please login to update or notify GEO. |
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| Submission date |
Apr 16, 2009 |
| Last update date |
Dec 22, 2017 |
| Contact name |
Motohiro Kato |
| Organization name |
University of Tokyo
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| Street address |
7-3-1, Hongo, Bunkyo-ku
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| City |
Tokyo |
| ZIP/Postal code |
113-8655 |
| Country |
Japan |
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| Platforms (2) |
| GPL2004 |
[Mapping50K_Hind240] Affymetrix Human Mapping 50K Hind240 SNP Array |
| GPL3718 |
[Mapping250K_Nsp] Affymetrix Mapping 250K Nsp SNP Array |
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| Samples (27)
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| Relations |
| BioProject |
PRJNA116647 |
| Supplementary file |
Size |
Download |
File type/resource |
| GSE15696_RAW.tar |
691.4 Mb |
(http)(custom) |
TAR (of CEL, CHP) |
| Processed data included within Sample table |
| Processed data provided as supplementary file |
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