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Series GSE157043 Query DataSets for GSE157043
Status Public on Sep 01, 2020
Title Whole-genome bisulfite sequencing across 27 developmental stages in Sus scrofa skeletal muscle
Organism Sus scrofa
Experiment type Methylation profiling by high throughput sequencing
Summary To obtain an overview of the methylome landscape in the developing pig skeletal muscle, 81 high-quality whole-genome bisulfite sequencing(WGBS) libraries that covered 27 developmental stages (3 biological replicates per stage) from embryonic day 33 (E33) to postnatal day 180 (D180) were produced by whole-genome bisulfite sequencing.
 
Overall design WGBS profiles of Sus scrofa skeletal muscles that covered 27 developmental stages.
 
Contributor(s) Tang Z
Citation(s) 33434283, 34811940
BioProject PRJNA490063
Submission date Aug 28, 2020
Last update date Feb 18, 2022
Contact name Zhonglin Tang
E-mail(s) tangzhonglin@caas.cn
Organization name Chinese Academy of Agricultural Sciences
Department Agricultural Genome Institute at Shenzhen
Street address No.7, Pengfei road, Dapeng District
City Shenzhen
State/province GuangDong
ZIP/Postal code 518100
Country China
 
Platforms (1)
GPL22918 HiSeq X Ten (Sus scrofa)
Samples (81)
GSM4751334 WGBS of Sus scrofa: skeletal muscle at E33, replicate1
GSM4751335 WGBS of Sus scrofa: skeletal muscle at E33, replicate2
GSM4751336 WGBS of Sus scrofa: skeletal muscle at E33, replicate3
This SubSeries is part of SuperSeries:
GSE157045 27 developmental stages in Sus scrofa skeletal muscle
Relations
SRA SRP160645

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE157043_C_level_result.txt.gz 3.4 Gb (ftp)(http) TXT
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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