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| Status |
Public on Sep 02, 2020 |
| Title |
Methylation array of arecoline treated human gingival epithelial cells |
| Organism |
Homo sapiens |
| Experiment type |
Methylation profiling by genome tiling array
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| Summary |
Identify the methylation level of genes in epithelial cells stimulated with arecoline, a main component of betel quid.
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| Overall design |
Human gingival epithelial progenitors were cultured and treated with a 3-day alternating regimen with/without 50 μg/ml arecoline for 1 month
Please note that experiments were performed technically as dual channel (eg, Cy3 and Cy5-labeled samples hybridized to the same array) but the results were processed as though they are single channel (Cy3 and Cy5 signals are calculated; Cy3/Cy5 ratios are not calculated), and thus the 'Raw data.txt' file contains raw data for both Sample 1 (Control) and Sample 2 (Arecoline).
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| Contributor(s) |
Abiko Y, Uehara O |
| Citation(s) |
32951127 |
| |
| Submission date |
Sep 01, 2020 |
| Last update date |
Dec 02, 2020 |
| Contact name |
Durga Paudel |
| E-mail(s) |
durga@hoku-iryo-u.ac.jp
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| Organization name |
Health Sciences University of Hokkaido
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| Street address |
Kanazawa
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| City |
Ishikari-Tobetsu |
| State/province |
Hokkaido |
| ZIP/Postal code |
061-0293 |
| Country |
Japan |
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| Platforms (1) |
| GPL9767 |
Agilent-014791 Human CpG Island ChIP-on-Chip Microarray 244K (G4492A) (Probe Name version) |
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| Samples (2) |
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| This SubSeries is part of SuperSeries: |
| GSE157248 |
Methylation and gene expression microarray of human gingival epithelial cells stimulated with arecoline |
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| Relations |
| BioProject |
PRJNA660625 |
