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| Status |
Public on Feb 24, 2021 |
| Title |
A multiOMICs approach shed light on the higher yield phenotype and abiotic stress tolerance in tobacco lines expressing the carrot lycopene β-cyclase1 |
| Organism |
Nicotiana tabacum |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
Recently we published a set of tobacco lines, expressing the Dacucus carota (carrot) DcLCYB1 gene, with accelerated development, increased carotenoid content, and plant yield. Due to this, expression of DcLCYB1 might be of general interest in crop species as a strategy to accelerate plant development and increase biomass production under adverse field conditions. However, to follow this path, a better understanding of the molecular basis of this phenotype is essential. Here, we combine OMICs (RNAseq, proteomics, metabolomics, and lipidomics) and stress experiments to advance our understanding on the broader effect of the LCYB expression on the tobacco genome and metabolism.
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| Overall design |
Overall 12 samples were analyzed including 3 transgenic lines and 1 wild type (control) and each sample consist of 3 biological replicates.
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| Contributor(s) |
Moreno JC, Martinez-Jaime S, Kosmacz M, Schulz P, Fischer A, Luzarowska U, Havaux M, Skirycz A |
| Citation(s) |
33613605 |
| |
| Submission date |
Sep 05, 2020 |
| Last update date |
Feb 24, 2021 |
| Contact name |
Juan Camilo Moreno Beltran |
| E-mail(s) |
juankmilo86@gmail.com
|
| Organization name |
MPI for Molecular Plant Physiology
|
| Department |
Molecular Physiology
|
| Lab |
Skirycz
|
| Street address |
Am Muehlenberg 1
|
| City |
Potsdam |
| State/province |
Brandenburg |
| ZIP/Postal code |
14476 |
| Country |
Germany |
| |
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| Platforms (1) |
| GPL23495 |
Illumina NextSeq 500 (Nicotiana tabacum) |
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| Samples (12)
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| Relations |
| BioProject |
PRJNA661663 |
| SRA |
SRP280213 |
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