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Series GSE157582 Query DataSets for GSE157582
Status Public on Apr 14, 2021
Title Gene expression profiling data following PTBP1 knockout in MKN-28 cells
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary We analysed the transcriptome profile by RNA-seq in PTBP1 knockout and control MKN-28 cells.
 
Overall design Compare the mRNA profiles between PTBP1 knockout and the control MKN-28 cells.
 
Contributor(s) Deng M
Citation(s)
  • Huang D, Zhang K, Zheng W, Zhang R et al. Long noncoding RNA SGO1-AS1 inactivates TGFβ signaling by facilitating TGFB1/2 mRNA decay and inhibits gastric carcinoma metastasis. J Exp Clin Cancer Res 2021 Oct 28;40(1):342. PMID: 34706749
Submission date Sep 07, 2020
Last update date Nov 04, 2021
Contact name Min Deng
E-mail(s) mindeng@gzhmu.edu.cn
Phone 86-20-66673666
Organization name Affiliated Cancer Hospital & Institute of Guangzhou Medical University
Street address 78 Hengzhigang Road
City Guangzhou
ZIP/Postal code 510095
Country China
 
Platforms (1)
GPL21290 Illumina HiSeq 3000 (Homo sapiens)
Samples (2)
GSM4770994 MKN-28 cells, Control
GSM4770995 MKN-28 cells, PTBP1-KO
Relations
BioProject PRJNA662048
SRA SRP280345

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE157582_RAW.tar 800.0 Kb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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