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Series GSE157589 Query DataSets for GSE157589
Status Public on Sep 08, 2020
Title Identification of genes regulated by Fer2 in PAM neurons using an overexpression approach
Organism Drosophila melanogaster
Experiment type Expression profiling by high throughput sequencing
Summary The transcription factor Fer2 plays a neuroprotective role in the dopaminergic neurons of the fly brain, but the underlying molecular mechanisms are not understood. By performing RNA-seq on isolated dopaminergic PAM neurons after Fer2 constitutive overexpression, we identified over one hundred genes differentially regulated in response to PAM-specific Fer2 overexpression.
 
Overall design RNA-seq on isolated dopaminergic PAM neurons from 14 day-old flies overexpressing a UAS-Fer2::FLAG transgene driven by a PAM specific GAL4 (R58-GAL4). Flies not carrying the UAS-Fer2::FLAG transgene were used as controls. N=3 per group.
 
Contributor(s) Loncle N, Nagoshi E
Citation(s) 35301315
Submission date Sep 07, 2020
Last update date Apr 06, 2022
Contact name Federico Miozzo
Organization name University of Geneva
Street address 30 Quai Ernest-Ansermet, CH-1211
City Geneva
ZIP/Postal code 1205
Country Switzerland
 
Platforms (1)
GPL17275 Illumina HiSeq 2500 (Drosophila melanogaster)
Samples (6)
GSM4771226 R58-GAL4_rep1
GSM4771227 R58-GAL4_rep2
GSM4771228 R58-GAL4_rep3
Relations
BioProject PRJNA662077
SRA SRP280352

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Supplementary file Size Download File type/resource
GSE157589_PAM_RNA-seq_RPKM.xlsx 1.8 Mb (ftp)(http) XLSX
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Raw data are available in SRA
Processed data are available on Series record

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