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Series GSE157646 Query DataSets for GSE157646
Status Public on Sep 21, 2020
Title RNA sequencing analysis of SLC6A15 overexpression in papillary thyroid cancer cells
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary Solute Carrier Family 6 Member 15 (SLC6A15) has been found with dysregulated expression in several kinds of cancers. However, its expression pattern and biological functions in papillary thyroid cancer (PTC) remain unknown. To explore the role of SLC6A15 in PTC, transcription profiling analysis was performed in KTC1 cells with or without SLC6A15 overexpression.
 
Overall design The mRNA profiles of KTC1-Vector and KTC1-SLC6A15 cells were generated by deep sequencing, in duplicate, using BGISEQ-500
 
Contributor(s) Chen Y, Li H, Guan H, Liang W, Li Y
Citation(s) 33690923
Submission date Sep 08, 2020
Last update date Apr 19, 2021
Contact name Yu xin Chen
E-mail(s) chenyx43@mail2.sysu.edu.cn
Phone 18819442345
Organization name The First Affiliated Hospital of Sun Yat-sen University
Department Department of Endocrinology and Diabetes Center
Lab Department of Endocrinology and Diabetes Center
Street address 58 Zhongshan Road II
City Guangzhou
State/province Guangdong
ZIP/Postal code 510080
Country China
 
Platforms (1)
GPL23227 BGISEQ-500 (Homo sapiens)
Samples (4)
GSM4771999 KTC1-Vector rep1
GSM4772000 KTC1-Vector rep2
GSM4772001 KTC1-SLC6A15 rep1
Relations
BioProject PRJNA662323
SRA SRP281216

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE157646_RAW.tar 850.0 Kb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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