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Series GSE157736 Query DataSets for GSE157736
Status Public on Sep 10, 2020
Title Cranial manipulation modulates cholinergic pathway gene expression in an animal model of age-related cognitive decline
Organism Rattus norvegicus
Experiment type Expression profiling by high throughput sequencing
Summary In this study, we examine the effect of cranial osteopathic manipulation (COM) on gene expression, in an animal model for age-related cognitive decline (aged rats). We found that COM significantly affected the expression of 36 genes in the neuronal pathway (False Discovery Rate (FDR) < 0.004). The top five neuronal genes with the largest fold-change (Slc5a7, Chat, Slc18a3, Adcy5 and Cacna2d2, >2-fold change, FDR<0.004) are part of the cholinergic neurotransmission mechanism, which is known to affect cognitive function.
 
Overall design Compare gene expression from RNA sequencing of tissue samples from prefrontal cortex of aged rats that have undergone cranial osteopathic manipulation to aged rats that did not receive the treatment
 
Contributor(s) Anandakrishnan R, Tobey H, Klein BG, Costa BM
Citation(s) 34995434
Submission date Sep 09, 2020
Last update date Jan 29, 2022
Contact name Ramu Anandakrishnan
E-mail(s) ramu@vt.edu
Phone 703-403-0234
Organization name Edward Via College of Osteopathic Medici
Department Biomedical Sciences
Lab Molecular Mechanism of Disease
Street address 2265 Kraft Dr
City Blacksburg
State/province VA
ZIP/Postal code 24060
Country USA
 
Platforms (1)
GPL20084 Illumina NextSeq 500 (Rattus norvegicus)
Samples (6)
GSM4774141 2BC1: Animal 1 untreated PFC
GSM4774142 2BC2: Animal 2 untreated PFC
GSM4774143 2BC3: Animal 3 untreated PFC
Relations
BioProject PRJNA662592
SRA SRP281885

Download family Format
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Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE157736_RAW.tar 12.9 Mb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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