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Series GSE157783 Query DataSets for GSE157783
Status Public on Sep 17, 2020
Title Single cell atlas of the human midbrain reveals cell state specific to Parkinson’s disease
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary Using single-nucleus RNA sequencing, we profiled postmortem midbrain tissue from Idiopathic Parkinson’s Disease patients and matched controls.
 
Overall design Single-cell transcriptomics of postmortem midbrain of six control and five idiopathic Parkinson's disease cases
 
Contributor(s) Prada-Medina CA, Smajić S, Dietrich C, Morris CM, Timmermann B, Grünewald A, Spielmann M
Citation(s) 34805149, 34919646, 37386035
Submission date Sep 10, 2020
Last update date Sep 11, 2023
Contact name Malte Spielmann
E-mail(s) spielman@molgen.mpg.de
Organization name Max Planck Institute for Molecular Genetics
Street address Ihnestraße 63
City Berlin
ZIP/Postal code 14195
Country Germany
 
Platforms (1)
GPL24676 Illumina NovaSeq 6000 (Homo sapiens)
Samples (11)
GSM4774931 IPD1
GSM4774932 IPD2
GSM4774933 IPD3
Relations
BioProject PRJNA662780
SRA SRP281977

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE157783_IPDCO_hg_midbrain_UMI.tar.gz 123.3 Mb (ftp)(http) TAR
GSE157783_IPDCO_hg_midbrain_cell.tar.gz 250.0 Kb (ftp)(http) TAR
GSE157783_IPDCO_hg_midbrain_genes.tar.gz 946.9 Kb (ftp)(http) TAR
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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