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Status |
Public on Jan 14, 2022 |
Title |
Redundant mechanisms driven independently by RUNX1 and GATA2 for hematopoietic development |
Organism |
Danio rerio |
Experiment type |
Expression profiling by high throughput sequencing
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Summary |
Here we used RNA sequencing to characterize the transcriptional profile of the kidney of runx1 knock out zebrafish adult compared to wild type.
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Overall design |
Bulk RNA-seq was performed on surgically dissected kidneys from wild type and runx1-/- siblings (~2.5 months old, pool of 3 kidneys/replicate, n= 3 for each genotype).
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Web link |
https://pubmed.ncbi.nlm.nih.gov/34492681/
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Contributor(s) |
Bresciani E, Kwon E, Yu K, dell'Orso S |
Citation(s) |
34492681 |
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Submission date |
Sep 16, 2020 |
Last update date |
Jan 16, 2022 |
Contact name |
Kai Yu |
E-mail(s) |
kai.yu@nih.gov
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Organization name |
NHGRI
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Street address |
50 South Drive, Bldg 50, Room 5151
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City |
Bethesda |
State/province |
Maryland |
ZIP/Postal code |
20892 |
Country |
USA |
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Platforms (1) |
GPL18413 |
Illumina HiSeq 2500 (Danio rerio) |
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Samples (6)
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This SubSeries is part of SuperSeries: |
GSE158101 |
Redundant mechanisms driven independently by RUNX1 and GATA2 for hematopoietic development |
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Relations |
BioProject |
PRJNA663959 |
SRA |
SRP282671 |