NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Series GSE158399 Query DataSets for GSE158399
Status Public on Aug 08, 2021
Title single-cell RNA sequencing reveals the mechanism of human breast cancer metastasis
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary To obtain more information about the lymph node metastasis of breast cancer cells, we selected the matched primary breast cancer (PC), positive lymph nodes (PL), and negative lymph nodes (NL) of the same patient to perform integrated analysis. The PC, PL, NL samples were analysed with single-cell RNA sequencing.
 
Overall design The matched primary breast cancer (PC), positive lymph nodes (PL), and negative lymph nodes (NL) samples were analysed with single-cell RNA sequencing.
 
Contributor(s) Xu K
Citation(s) 33564857
Submission date Sep 22, 2020
Last update date Aug 09, 2021
Contact name kun xu
E-mail(s) njmuxukun@126.com
Phone 15250969355
Organization name Department of Oncology, The First Affiliated Hospital of Nanjing Medical University
Street address guangzhou road 300
City Nanjing
ZIP/Postal code 210029
Country China
 
Platforms (1)
GPL20795 HiSeq X Ten (Homo sapiens)
Samples (3)
GSM4798908 primary breast cancer-scRNA
GSM4798909 positive lymph node-scRNA
GSM4798910 negative lymph node-scRNA
Relations
BioProject PRJNA665068
SRA SRP285030

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE158399_RAW.tar 32.5 Mb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap