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Series GSE158639 Query DataSets for GSE158639
Status Public on Oct 01, 2020
Title The acute host-response of turkeys colonized with Campylobacter coli
Organism Meleagris gallopavo
Experiment type Expression profiling by high throughput sequencing
Summary Consumption of contaminated poultry products is one of the main sources of human campylobacteriosis, of which Campylobacter jejuni subsp. jejuni (C. jejuni) and C. coli are responsible for approximately 98% of the cases. The ceca of commercial turkeys are the main anatomical site where Campylobacter asymptomatically colonizes. We have previously colonized the ceca of commercial turkey poults with C. jejuni, and demonstrated acute changes in cytokine gene expression in cecal tissue and histologically scored intestinal lesions at 2 days post-inoculation (dpi). The host-response of turkeys to C. coli colonization is unknown. Cecal tonsils (CT) are an important part of the gastrointestinal-associated lymphoid tissue that function to sample material passing in and out of the ceca and generating immune responses against intestinal pathogens. The CT immune response towards Campylobacter is unknown. In this study, we generated a C. coli kanamycin-resistant construct (CcK) for enumeration from cecal contents after experimental challenge. In vitro analysis of CcK demonstrated no changes in motility when compared to the parent isolate, but in vitro growth rates were significantly different than the parent strain. Poults were inoculated by oral gavage with CcK (5x10^7 cfu) or sterile-media (mock-colonized), and euthanized at 1 and 3 dpi. At both time points, CcK was recovered from cecal contents, but not from the mock-colonized group. As a marker of acute inflammation, serum alpha-1 acid glycoprotein was significantly elevated at 3 dpi in CcK inoculated poults compared to mock-infected samples. Significant histological lesions were detected in cecal and CT tissues of CcK colonized poults at 1 and 3 dpi, respectively. RNAseq analysis identified 250 differentially expressed genes (DEG) in CT from CcK colonized poults at 3 dpi, of which 194 were upregulated and 56 were downregulated. From the DEG, 9 significantly enriched biological pathways were identified, including platelet aggregation, response to oxidative stress and negative regulation of oxidative stress-induced intrinsic apoptotic signaling pathway. These data suggest that C. coli induced an acute inflammatory response in the intestinal tract of poults, and that platelet aggregation and oxidative stress in the CT may affect the turkey’s ability to resist Campylobacter colonization. Results from this study provide insight into host-response of the turkey CT to Campylobacter colonization. These findings will help to develop and test Campylobacter mitigation strategies to promote food safety in commercial turkeys.
 
Overall design Transcriptomic profile of turkey cecal tonsils colonized with Campylobacter coli, eight biological replicates, using Illumina HiSeq3000.
 
Contributor(s) Sylte MJ, Sivasankaran SK, Trachsel J, Sato Y, Wu Z, Looft T, Johnson TA, Chandra LC, Zhang Q
Citation(s) 33889603
Submission date Sep 28, 2020
Last update date Apr 28, 2021
Contact name Sathesh K Sivasankaran
E-mail(s) sathesh@iastate.edu
Organization name University of Missouri
Lab Bioinformatics and Analytics Core
Street address Bond Life Sciences Center Suite 106, 1201 Rollins Street
City Columbia
State/province MO
ZIP/Postal code 65211
Country USA
 
Platforms (1)
GPL29195 Illumina HiSeq 3000 (Meleagris gallopavo)
Samples (32)
GSM4804830 D1 - CcK #1 [9-1CT]
GSM4804831 D1 - CcK #2 [9-2CT]
GSM4804832 D1 - CcK #3 [9-3CT]
Relations
BioProject PRJNA666087
SRA SRP285596

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE158639_RAW.tar 2.7 Mb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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