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Series GSE158810 Query DataSets for GSE158810
Status Public on Nov 27, 2020
Title Effects of cAMP supplementation on the transcriptome of Streptomyces coelicolor M145 strain
Organism Streptomyces coelicolor
Experiment type Expression profiling by high throughput sequencing
Summary To identify unique gene expression in cAMP supplemented Streptomyces coelicolor M145 strain. The genes with different gene expression might be key genes to understand the effects of cAMP supplementation on the transcriptome of Streptomyces coelicolor M145.
 
Overall design 1 time point, 1 strain, 2 condiitons: control and cAMP supplemented culture, 3 replicates
 
Contributor(s) Nitta K, Del Carratore F, Breitling R, Takano E
Citation(s) 33251203
https://doi.org/10.3389/fbioe.2020.595552
Submission date Sep 30, 2020
Last update date Dec 01, 2020
Contact name Katsuaki Nitta
E-mail(s) katsuaki_nitta@bio.eng.osaka-u.ac.jp
Organization name Osaka University
Street address Yamadaoka 2-1
City Suita
State/province Osaka
ZIP/Postal code 06-6879-4170
Country Japan
 
Platforms (1)
GPL28977 Illumina NextSeq 500 (Streptomyces coelicolor)
Samples (6)
GSM4811064 Streptomyces coelicolor_M145_50h_1
GSM4811065 Streptomyces coelicolor_M145_50h_2
GSM4811066 Streptomyces coelicolor_M145_50h_3
Relations
BioProject PRJNA666633
SRA SRP285903

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE158810_RNAseq_cAMP_supplemented_M145_processed_data.txt.gz 218.7 Kb (ftp)(http) TXT
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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