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Series GSE159439 Query DataSets for GSE159439
Status Public on Jun 25, 2021
Title MethylC-capture sequencing and RNA sequencing of control (CTL), chronic nonbacterial prostatitis (CNP) and polysaccharide (PPs)-treated SD rats [Bisulfite-Seq]
Organism Rattus norvegicus
Experiment type Methylation profiling by high throughput sequencing
Summary SD rats were intramuscular injected with dexamethasone to induce osteCPorosis, and treated with APS. Then, colonic epithelia of control, osteCPorotic and APS-treated osteCPorotic rats were collected for MethylC-capture sequencing .
 
Overall design examination of DNA methylation in colonic epithelia of three groups of rats
 
Contributor(s) Liu J, Peng X
Citation missing Has this study been published? Please login to update or notify GEO.
Submission date Oct 13, 2020
Last update date Sep 21, 2021
Contact name Ruiqiang Yan
E-mail(s) ruiqiang_yan@shbio.com
Organization name Jinan University
Street address 黄埔大道西601号
City guangzhou
ZIP/Postal code 510632
Country China
 
Platforms (1)
GPL24688 HiSeq X Ten (Rattus norvegicus)
Samples (9)
GSM4829866 CTL1 (Bisulfite-Seq)
GSM4829867 CTL2 (Bisulfite-Seq)
GSM4829868 CTL3 (Bisulfite-Seq)
This SubSeries is part of SuperSeries:
GSE159440 MethylC-capture sequencing and RNA sequencing of control (CTL), chronic nonbacterial prostatitis (CNP) and polysaccharide (PPs)-treated SD rats
Relations
BioProject PRJNA668948
SRA SRP287239

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE159439_RAW.tar 2.2 Gb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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