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Series GSE159643 Query DataSets for GSE159643
Status Public on Mar 23, 2021
Title Transcriptomic response in the intestine of gilthead sea bream (Sparus aurata) fed garlic, carvacrol and thymol essential oils (EOs) additive.
Organism Sparus aurata
Experiment type Expression profiling by array
Summary Explore the underlying mechanisms-of-action of the essential oils diet in the intestine of gilthead seabream.
 
Overall design Transcriptomic analysis was conducted in order to determine the differences on gene expression level between these two dietary strategies at mid-anterior intestine-specific level. The experimental design included two conditions: (1) fish fed basal diet with no essential oils (EOs) added (control); (2) fish fed 0.5% inclusion of a microencapsulated additive composed of a blend of garlic, carvacrol, and thymol synthetic EOs. After 65 days of feeding trial, total RNA were extracted invidually from gilthead sea bream (S. aurata) intestine fed basal diet or an experimental diet containing 0.5% inclusion. Total RNA samples were grouped into 3 pools (n= 4 fish for each condition). The transcriptomic analysis was done following a reference design using the control diet group as reference.
 
Contributor(s) Firmino JP, Vallejos-Vidal EC, Reyes-López FE, Gisbert E
Citation(s) 33746962
Submission date Oct 19, 2020
Last update date Mar 23, 2021
Contact name Felipe E. Reyes-López
Organization name Universitat Autonoma de Barcelona
Department Cell Biology, Physiology and Immunology
Lab AQUAB-FISH
Street address Animal Physiology Unit, Department of Cell Biology, Physiology and Immunology, Faculty of Biosciences, Universitat Autònoma de Barcelona
City Bellaterra
State/province Barcelona
ZIP/Postal code 08193
Country Spain
 
Platforms (1)
GPL13442 Aquagenomic Sparus aurata oligonucleotide-microarray (SAQ)
Samples (6)
GSM4836596 Control_Gut_1
GSM4836597 Control_Gut_2
GSM4836598 Control_Gut_3
Relations
BioProject PRJNA669885

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE159643_RAW.tar 13.5 Mb (http)(custom) TAR (of TXT)
Processed data included within Sample table

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