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Series GSE159704 Query DataSets for GSE159704
Status Public on Dec 01, 2021
Title Ovol1 regulates psoriasis-like skin inflammation and epidermal hyperplasia
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Psoriasis is a common inflammatory skin disease characterized by aberrant inflammation and epidermal hyperplasia. Molecular mechanisms that regulate psoriasis-like skin inflammation remain to be fully understood. Here we show that the expression of Ovol1 transcription factor is upregulated in psoriatic skin, and its deletion results in aggravated psoriasis-like skin symptoms following stimulation with imiquimod (IMQ). Using bulk and single-cell RNA-sequencing, we identify molecular changes in the epidermal, fibroblast and immune cells of Ovol1-deficient skin that reflect altered course of epidermal differentiation and enhanced inflammatory responses. Furthermore, we provide evidence for excessive full-length IL-1 signaling in the microenvironment of IMQ-treated Ovol1-deficient skin that functionally contributes to immune cell infiltration and epidermal hyperplasia. Collectively, our study uncovers a protective role for Ovol1 in curtailing psoriasis-like inflammation and the associated skin pathology
 
Overall design Droplet-based single cell RNA-seq experiments were performed to identify molecular differences between control and Ovol1 null in untreated and imiquimod (IMQ) treated adult murine back skin.
 
Contributor(s) Dai X, Sun P, Vu R, Gutierrez G
Citation(s) 33333123
Submission date Oct 20, 2020
Last update date Feb 10, 2022
Contact name Remy Vu
E-mail(s) phuongnv@uci.edu
Organization name University of California, Irvine
Street address D288 Med Sci I Health Sciences Rd
City Irvine
ZIP/Postal code 92697
Country USA
 
Platforms (1)
GPL21103 Illumina HiSeq 4000 (Mus musculus)
Samples (4)
GSM4837954 Control_Untreated
GSM4837955 Control_IMQ
GSM4837956 Ovol1_null_Untreated
Relations
BioProject PRJNA670225
SRA SRP287854

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE159704_barcodes.tsv.gz 93.1 Kb (ftp)(http) TSV
GSE159704_genes.tsv.gz 212.7 Kb (ftp)(http) TSV
GSE159704_matrix.mtx.gz 131.9 Mb (ftp)(http) MTX
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Raw data are available in SRA
Processed data are available on Series record

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