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Series GSE16243 Query DataSets for GSE16243
Status Public on May 31, 2010
Title Analysis of cardiac gene expression in response to isoproterenol-induced heart failure (part 1)
Organism Mus musculus
Experiment type Expression profiling by array
Summary Myoglobin knockout mice (myo-/-) adapt to the loss of myoglobin by the activation of a variety of compensatory mechanisms on the structural and functional level. In order to analyze to what extent myo-/- mice would tolerate cardiac stress we used the model of chronic isoproterenol application to induce cardiac hypertrophy in myo-/- mice and wild type (WT) controls. After 14 d of isoproterenol infusion cardiac hypertrophy in WT and myo-/- mice reached a similar level. WT mice developed lung oedema and left ventricular dilatation indicating the development of heart failure. In contrast, myo-/- mice displayed conserved cardiac function and no signs of heart failure. Analysis of the cardiac gene expression profile using 40 k mouse oligonucleotide arrays showed that isoproterenol affected the expression of 180 genes in WT but only 92 genes of myo-/- hearts.
Only 40 of these genes were regulated in WT and myo-/- hearts. Whereas in WT hearts a prononced induction of genes of the extracellular matrix occurred suggesting a higher level of remodelling, in myo-/- hearts genes of carbon metabolism and genes linked to inhibition of apoptosis and muscular repair were altered. Interestingly, a subset of genes which was altered in myo-/- mice already under basal conditions was differentially expressed in WT hearts under isoproterenol treatment. In summary, our data show, that the genetic background (WT, myo-/-) has a major impact on cardiac gene expression even in the context of an aggressive hypertrophy model such as chronic isoproterenol stimulation.

Keywords: gene expression profiling of isoproterenol induced heart failure in WT and myo-/- mice
 
Overall design We analysed the cardiac gene expression profiles in a total of 32 hearts subdivided into 4 groups (8 WT vehicle, 8 WT ISO, 8 myo-/- vehicle, 8 myo-/- ISO).
 
Contributor(s) Molojavyi A, Lindecke A, Kessels C, Kocks S, Köhrer K, Gödecke A
Citation(s) 20145201
Submission date May 27, 2009
Last update date Mar 21, 2012
Contact name Antje Lindecke
E-mail(s) antje.lindecke@uni-duesseldorf.de
Phone 49-211-8114367
Organization name Universitaet Duesseldorf
Department BMFZ
Lab Microarray
Street address Universitaetsstr. 1
City Duesseldorf
ZIP/Postal code 40225
Country Germany
 
Platforms (1)
GPL8599 BMFZ Mouse 40K V.1 part 1
Samples (16)
GSM409037 wt_ko_rep1
GSM409038 wt_ko_rep2
GSM409039 wt_ko_rep3
Relations
BioProject PRJNA115177

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE16243_RAW.tar 23.9 Mb (http)(custom) TAR (of GPR)
Processed data included within Sample table

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