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Series GSE162868 Query DataSets for GSE162868
Status Public on Sep 30, 2021
Title Integrative tissue analysis of men with prostate cancer III
Organism Homo sapiens
Experiment type Genome variation profiling by SNP array
Summary Prostate cancer is readily curable if detected early.
The overall goal of this study is to conduct integrative profiling of tumor and blood genomics and transcriptomics.
 
Overall design To identify potential genomic drivers of tumor aggressivity, we conducted whole genome somatic copy number analysis using OncoScan CNV arrays.
 
Contributor(s) Sowalsky AG, Ruppin E, Aldape KD
Citation(s) 38112617
Submission date Dec 08, 2020
Last update date Jan 29, 2024
Contact name Adam Sowalsky
Organization name National Cancer Institute
Department LGCP
Lab Sowalsky Lab
Street address 37 Convent Drive Building 37 Room 1062B
City Bethesda
State/province MD
ZIP/Postal code 20892
Country USA
 
Platforms (1)
GPL21558 [OncoScan_CNV] Affymetrix OncoScan CNV FFPE Assay
Samples (84)
GSM4964390 DNA_oncoscan_prostatecancer_15-008/001
GSM4964391 DNA_oncoscan_prostatecancer_15-008/003
GSM4964392 DNA_oncoscan_prostatecancer_15-008/004
This SubSeries is part of SuperSeries:
GSE183040 Integrative tissue analyses of men with prostate cancer
Relations
BioProject PRJNA683619

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE162868_RAW.tar 2.0 Gb (http)(custom) TAR (of CEL, OSCHP)
GSE162868_SummaryGenes.txt.gz 1.8 Mb (ftp)(http) TXT
Processed data provided as supplementary file
Processed data are available on Series record
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