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| Status |
Public on Feb 24, 2021 |
| Title |
Genome wide RNA-Seq of LOG OX1 and wildtype Chlorella variabilis cultures |
| Organism |
Chlorella variabilis |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
To assess the significant downstream pathways affected by the overexpression of LONELY GUY in Chlorella, transcriptome analysis was carried out using RNA sequencing of three biological replicates each from WT and LOG OX1 at 14 dpi (1h before dark phase). The 14 dpi was chosen for the analysis because it was in the middle of the growth phase, where the slower growth of LOG OX1 was evident.
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| Overall design |
mRNA profiles of 14 dpi (days post inoculation) cultures of LOG OX1 and wild type Chlorella variabilis
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| |
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| Contributor(s) |
Nayar S |
| Citation(s) |
33613586 |
| |
| Submission date |
Dec 10, 2020 |
| Last update date |
Feb 24, 2021 |
| Contact name |
Saraswati Nayar |
| E-mail(s) |
saraswatin@rgcb.res.in
|
| Organization name |
Rajiv Gandhi Centre for Biotechnology
|
| Street address |
Thycaud Post, Poojappura
|
| City |
Thiruvananthapuram |
| State/province |
Kerala |
| ZIP/Postal code |
695014 |
| Country |
India |
| |
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| Platforms (1) |
| GPL29492 |
HiSeq X Ten (Chlorella variabilis) |
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| Samples (6)
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| Relations |
| BioProject |
PRJNA684137 |
| SRA |
SRP297559 |
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