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Series GSE163290 Query DataSets for GSE163290
Status Public on Jun 21, 2022
Title Cyclophilin D promotes disease tolerance to influenza A virus infection by licensing NK cell development and function
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary An effective immune response to influenza A virus (IAV) requires two arms: host resistance, which restricts viral replication, and disease tolerance that limits tissue damage caused by the immune response to IAV. Interestingly, fatal influenza infections are more often associated with dysregulated inflammation, rather than an inability to control viral replication, highlighting the importance of mechanisms involved in disease tolerance to IAV. Here, we show that cyclophilin D (CypD), a mitochondrial protein known to regulate cell death and cytokine production, protects against IAV infection through disease tolerance. Mice deficient in CypD (CypD-/-) exhibit enhanced susceptibility to IAV infection, despite comparable myeloid immune responses and intact antiviral immunity. Instead, CypD-/- susceptibility was due to pulmonary tissue damage, caused by a lack of the cytokine IL-22 that protects the lung epithelium. We found the necessary source of IL-22 following IAV infection to be conventional natural killer (NK) cells that failed to reach the airways of infected CypD-deficient mice, as a result of dysregulated lymphopoiesis in the bone marrow. Importantly, following infection, a single administration of recombinant IL-22 in the airways abrogated pulmonary damage and rescued CypD-/- mice. Thus, the CypD/IL-22/NK cell axis is critical in immunity to IAV by promoting disease tolerance, limiting lung tissue damage and maintaining pulmonary function.
 
Overall design RNA expression profiles of control (uninfected) and influenza-infected purified splenic natural killer (NK) cells from wild type (WT) and CypD knockout mice
 
Contributor(s) Downey J, Randolph HE, Pernet E, Tran KA, Khader SA, Barriero LB, Divangahi M
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Submission date Dec 15, 2020
Last update date Jun 21, 2022
Contact name Luis B Barreiro
E-mail(s) barreirolabchicago@gmail.com
Organization name University of Chicago
Lab Barreiro Lab
Street address 900 E 57th Street
City Chicago
ZIP/Postal code 60637
Country USA
 
Platforms (1)
GPL24247 Illumina NovaSeq 6000 (Mus musculus)
Samples (10)
GSM4976708 W0_WT_NI
GSM4976709 W1_WT_flu
GSM4976710 W2_WT_flu
Relations
BioProject PRJNA685547
SRA SRP298064

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SOFT formatted family file(s) SOFTHelp
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Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE163290_Mus_musculus.mm10.81.kallisto.gene_level.lengthScaledTPM_counts.txt.gz 2.5 Mb (ftp)(http) TXT
GSE163290_Mus_musculus.mm10.81.kallisto.gene_level.raw_counts.txt.gz 4.4 Mb (ftp)(http) TXT
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Raw data are available in SRA
Processed data are available on Series record

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