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Series GSE16393 Query DataSets for GSE16393
Status Public on Jun 05, 2009
Title eqtl analysis (random pair design)-Establishing the network of seed gene expression and analysis of its biodiversity
Organism Arabidopsis thaliana
Experiment type Expression profiling by array
Summary gnp3_tri33-arabidoseed - eqtl analysis (random pair design) - WP3 : Biodiversity of seed traits : state of the art - Comparison of the developping seed transcriptome in 160 Bay0/Sha Recombinant Inbred Lines (RILs) at 10 days after pollinisation.

Keywords: genotype and ecotype comparison
 
Overall design 80 dye-swap - CATMA arrays
Web link http://urgv.evry.inra.fr/cgi-bin/projects/CATdb/consult_expce.pl?experiment_id=165
 
Contributor(s) Elftieh S, Caboche M, Renou JP, Martin-Magniette ML
Citation missing Has this study been published? Please login to update or notify GEO.
Submission date Jun 02, 2009
Last update date May 03, 2012
Contact name sandrine balzergue
Organization name INRA
Lab IRHS
Street address Rue G. Morel
City Beaucouze
ZIP/Postal code 49000
Country France
 
Platforms (1)
GPL4346 URGV Arabidopsis thaliana 25K CATMA_v2.2
Samples (160)
GSM411493 13415210 - RIL 19 vs RIL 334
GSM411494 13415214 - RIL 334 vs RIL 19
GSM411495 13415217 - RIL 199 vs RIL 176
Relations
BioProject PRJNA116281

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE16393_RAW.tar 319.3 Mb (http)(custom) TAR (of GPR)
Processed data included within Sample table

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