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GEO accession:
Series GSE16393
Query DataSets for GSE16393
Status
Public on Jun 05, 2009
Title
eqtl analysis (random pair design)-Establishing the network of seed gene expression and analysis of its biodiversity
Organism
Arabidopsis thaliana
Experiment type
Expression profiling by array
Summary
gnp3_tri33-arabidoseed - eqtl analysis (random pair design) - WP3 : Biodiversity of seed traits : state of the art - Comparison of the developping seed transcriptome in 160 Bay0/Sha Recombinant Inbred Lines (RILs) at 10 days after pollinisation.
Keywords: genotype and ecotype comparison
Overall design
80 dye-swap - CATMA arrays
Web link
http://urgv.evry.inra.fr/cgi-bin/projects/CATdb/consult_expce.pl?experiment_id=165
Contributor(s)
Elftieh S
,
Caboche M
,
Renou JP
,
Martin-Magniette ML
Citation missing
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Submission date
Jun 02, 2009
Last update date
May 03, 2012
Contact name
sandrine balzergue
Organization name
INRA
Lab
IRHS
Street address
Rue G. Morel
City
Beaucouze
ZIP/Postal code
49000
Country
France
Platforms (1)
GPL4346
URGV Arabidopsis thaliana 25K CATMA_v2.2
Samples (160)
Less...
More...
GSM411493
13415210 - RIL 19 vs RIL 334
GSM411494
13415214 - RIL 334 vs RIL 19
GSM411495
13415217 - RIL 199 vs RIL 176
GSM411496
13415218 - RIL 176 vs RIL 199
GSM411497
13415220 - RIL 232 vs RIL 256
GSM411498
13415221 - RIL 256 vs RIL 232
GSM411499
13415222 - RIL 175 vs RIL 214
GSM411500
13415223 - RIL 214 vs RIL 175
GSM411501
13415225 - RIL 186 vs RIL 271
GSM411502
13415227 - RIL 271 vs RIL 186
GSM411503
13415228 - RIL 187 vs RIL 234
GSM411504
13415229 - RIL 234 vs RIL 187
GSM411505
13415230 - RIL 170 vs RIL 267
GSM411506
13415234 - RIL 267 vs RIL 170
GSM411507
13415235 - RIL 173 vs RIL 349
GSM411508
13415237 - RIL 349 vs RIL 173
GSM411509
13415238 - RIL 180 vs RIL 309
GSM411510
13415239 - RIL 309 vs RIL 180
GSM411511
13415240 - RIL 136 vs RIL 183
GSM411512
13415242 - RIL 183 vs RIL 136
GSM411513
13415243 - RIL 190 vs RIL 314
GSM411514
13415247 - RIL 314 vs RIL 190
GSM411515
13415248 - RIL 143 vs RIL 336
GSM411516
13415250 - RIL 336 vs RIL 143
GSM411517
13415251 - RIL 236 vs RIL 300
GSM411518
13415252 - RIL 300 vs RIL 236
GSM411519
13415373 - RIL 22 vs RIL 90
GSM411520
13415374 - RIL 90 vs RIL 22
GSM411521
13415386 - RIL 118 vs RIL 359
GSM411522
13415387 - RIL 359 vs RIL 118
GSM411523
13415388 - RIL 195 vs RIL 368
GSM411524
13415390 - RIL 368 vs RIL 195
GSM411525
13483904 - RIL 112 vs RIL 147
GSM411526
13483906 - RIL 147 vs RIL 112
GSM411527
13483921 - RIL 15 vs RIL 17
GSM411528
13483925 - RIL 17 vs RIL 15
GSM411529
13483923 - RIL 202 vs RIL 116
GSM411530
13483924 - RIL 116 vs RIL 202
GSM411531
13484371 - RIL 100 vs RIL 102
GSM411532
13484372 - RIL 102 vs RIL 100
GSM411533
13484375 - RIL 120 vs RIL 157
GSM411534
13484377 - RIL 157 vs RIL 120
GSM411535
13484379 - RIL 210 vs RIL 220
GSM411536
13484380 - RIL 220 vs RIL 210
GSM411537
13484381 - RIL 248 vs RIL 305
GSM411538
13484382 - RIL 305 vs RIL 248
GSM411539
13484383 - RIL 162 vs RIL 328
GSM411540
13484384 - RIL 328 vs RIL 162
GSM411541
13484387 - RIL 16 vs RIL 357
GSM411542
13484388 - RIL 357 vs RIL 16
GSM411543
13484392 - Bay0 = 1 vs RIL 365
GSM411544
13484393 - RIL 365 vs Bay0 = 1
GSM411545
13484394 - RIL 252 vs RIL 381
GSM411546
13484395 - RIL 381 vs RIL 252
GSM411547
13484397 - RIL 394 vs RIL 133
GSM411548
13484569 - RIL 133 vs RIL 394
GSM411549
13484556 - RIL 200 vs RIL 398
GSM411550
13484557 - RIL 398 vs RIL 200
GSM411551
13484560 - RIL 146 vs RIL 402
GSM411552
13484561 - RIL 402 vs RIL 146
GSM411553
13484567 - RIL 134 vs RIL 413
GSM411554
13484568 - RIL 413 vs RIL 134
GSM411555
13484570 - RIL 274 vs RIL 430
GSM411556
13484571 - RIL 430 vs RIL 274
GSM411557
13487180 - RIL 165 vs RIL 424
GSM411558
13487182 - RIL 424 vs RIL 165
GSM411559
13487183 - RIL 150 vs RIL 387
GSM411560
13487184 - RIL 387 vs RIL 150
GSM411561
13487192 - RIL 110 vs RIL 298
GSM411562
13487193 - RIL 298 vs RIL 110
GSM411563
13487196 - RIL 30 vs RIL 104
GSM411564
13487197 - RIL 104 vs RIL 30
GSM411565
13487198 - RIL 127 vs RIL 140
GSM411566
13487199 - RIL 140 vs RIL 127
GSM411567
13487201 - RIL 121 vs RIL 131
GSM411568
13487202 - RIL 131 vs RIL 121
GSM411569
13415215 - RIL 56 vs RIL 388
GSM411570
13415216 - RIL 388 vs RIL 56
GSM411571
13415253 - RIL 70 vs RIL 286
GSM411572
13415254 - RIL 286 vs RIL 70
GSM411573
13415375 - RIL 320 vs RIL 345
GSM411574
13415376 - RIL 345 vs RIL 320
GSM411575
13415377 - RIL 8 vs RIL 326
GSM411576
13415378 - RIL 326 vs RIL 8
GSM411577
13415379 - RIL 47 vs RIL 48
GSM411578
13415381 - RIL 48 vs RIL 47
GSM411579
13415382 - RIL 65 vs RIL 379
GSM411580
13415385 - RIL 379 vs RIL 65
GSM411581
13415391 - RIL 59 vs RIL 92
GSM411582
13415392 - RIL 92 vs RIL 59
GSM411583
13415393 - RIL 302 vs RIL 306
GSM411584
13415394 - RIL 306 vs RIL 302
GSM411585
13415395 - RIL 101 vs RIL 382
GSM411586
13415396 - RIL 382 vs RIL 101
GSM411587
13419733 - RIL 3 vs RIL 137
GSM411588
13419734 - RIL 137 vs RIL 3
GSM411589
13419735 - RIL 363 vs RIL 390
GSM411590
13419736 - RIL 390 vs RIL 363
GSM411591
13419737 - RIL 362 vs RIL 409
GSM411592
13419739 - RIL 409 vs RIL 362
GSM411593
13419740 - RIL 18 vs RIL 319
GSM411594
13419743 - RIL 319 vs RIL 18
GSM411595
13419744 - RIL 106 vs RIL 262
GSM411596
13419745 - RIL 262 vs RIL 106
GSM411597
13419746 - RIL 71 vs RIL 358
GSM411598
13419747 - RIL 358 vs RIL 71
GSM411599
13419749 - RIL 308 vs RIL 351
GSM411600
13419750 - RIL 351 vs RIL 308
GSM411601
13483899 - RIL 55 vs RIL 114
GSM411602
13483900 - RIL 114 vs RIL 55
GSM411603
13483902 - RIL 42 vs RIL 279
GSM411604
13483903 - RIL 279 vs RIL 42
GSM411605
13483907 - RIL 325 vs RIL 330
GSM411606
13483908 - RIL 330 vs RIL 325
GSM411607
13483915 - RIL 77 vs RIL 264
GSM411608
13483916 - RIL 264 vs RIL 77
GSM411609
13483917 - Sha vs Bay0
GSM411610
13483918 - Bay0 vs Sha
GSM411611
13483926 - RIL 7 vs RIL 135
GSM411612
13484161 - RIL 135 vs RIL 7
GSM411613
13484051 - RIL 34 vs RIL 273
GSM411614
13484052 - RIL 273 vs RIL 34
GSM411615
13484053 - RIL 45 vs RIL 49
GSM411616
13484054 - RIL 49 vs RIL 45
GSM411617
13484135 - RIL 61 vs RIL 126
GSM411618
13484136 - RIL 126 vs RIL 61
GSM411619
13484139 - RIL 58 vs RIL 378
GSM411620
13484151 - RIL 378 vs RIL 58
GSM411621
13484141 - RIL 53 vs RIL 191
GSM411622
13484152 - RIL 191 vs RIL 53
GSM411623
13484145 - RIL 376 vs RIL 36
GSM411624
13484163 - RIL 36 vs RIL 376
GSM411625
13484146 - RIL 62 vs RIL 198
GSM411626
13484147 - RIL 198 vs RIL 62
GSM411627
13484153 - RIL 73 vs RIL 289
GSM411628
13484154 - RIL 289 vs RIL 73
GSM411629
13484155 - RIL 81 vs RIL 97
GSM411630
13484156 - RIL 97 vs RIL 81
GSM411631
13484158 - RIL 84 vs RIL 335
GSM411632
13484159 - RIL 335 vs RIL 84
GSM411633
13484373 - RIL 98 vs RIL 123
GSM411634
13484374 - RIL 123 vs RIL 98
GSM411635
13484378 - RIL 83 vs RIL 204
GSM411636
13484386 - RIL 204 vs RIL 83
GSM411637
13484390 - RIL 343 vs RIL 364
GSM411638
13484391 - RIL 364 vs RIL 343
GSM411639
13484558 - RIL 5 vs RIL 400
GSM411640
13484559 - RIL 400 vs RIL 5
GSM411641
13484562 - RIL 4 vs RIL 197
GSM411642
13484563 - RIL 197 vs RIL 4
GSM411643
13484564 - RIL 37 vs RIL 410
GSM411644
13484566 - RIL 410 vs RIL 37
GSM411645
13487186 - RIL 67 vs RIL 179
GSM411646
13487187 - RIL 179 vs RIL 67
GSM411647
13487188 - RIL 94 vs RIL 149
GSM411648
13487190 - RIL 149 vs RIL 94
GSM411649
13487189 - RIL 99 vs RIL 194
GSM411650
13487195 - RIL 194 vs RIL 99
GSM411651
13487203 - RIL 32 vs RIL 155
GSM411652
13487206 - RIL 155 vs RIL 32
Relations
BioProject
PRJNA116281
Download family
Format
SOFT formatted family file(s)
SOFT
MINiML formatted family file(s)
MINiML
Series Matrix File(s)
TXT
Supplementary file
Size
Download
File type/resource
GSE16393_RAW.tar
319.3 Mb
(http)
(custom)
TAR (of GPR)
Processed data included within Sample table
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