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Series GSE164225 Query DataSets for GSE164225
Status Public on Aug 24, 2021
Title MKN7_EB by EHF knockdown
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Genome binding/occupancy profiling by high throughput sequencing
Summary This SuperSeries is composed of the SubSeries listed below.
 
Overall design Refer to individual Series
 
Citation(s)
  • Li W, Okabe A, Usui G, Fukuyo M et al. Activation of EHF via STAT3 phosphorylation by LMP2A in Epstein-Barr virus-positive gastric cancer. Cancer Sci 2021 Aug;112(8):3349-3362. PMID: 34014591
Submission date Jan 04, 2021
Last update date Aug 25, 2021
Contact name Masaki Fukuyo
E-mail(s) fukuyo@chiba-u.jp
Organization name Chiba University
Department Department of Molecular Oncology
Street address 1-8-1 Inohana, Chuo-ku
City Chiba
ZIP/Postal code 260-8670
Country Japan
 
Platforms (2)
GPL18460 Illumina HiSeq 1500 (Homo sapiens)
GPL18573 Illumina NextSeq 500 (Homo sapiens)
Samples (10)
GSM5004244 MKN7_EB_H3K4me3_Bulk_cells
GSM5004245 MKN7_WT_H3K4me3 (MKN7_EB control)
GSM5004246 MKN7_EB_H3K4me1_Bulk_cells
This SuperSeries is composed of the following SubSeries:
GSE164223 Genome-wide analysis of histone modification alteration in MKN7_EB by EHF knockdown (ChIP-Seq).
GSE164224 Genome-wide analysis of gene expression in MKN7_EB by EHF knockdown (RNA-Seq).
Relations
BioProject PRJNA689579

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE164225_RAW.tar 1.1 Gb (http)(custom) TAR (of BEDGRAPH, BIGWIG, FPKM_TRACKING)
SRA Run SelectorHelp

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