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Series GSE165104 Query DataSets for GSE165104
Status Public on Jun 14, 2022
Title Transplanted human organoids empower PK/PD assessment of drug candidate for the clinic
Organisms Homo sapiens; Rattus norvegicus
Experiment type Expression profiling by high throughput sequencing
Summary Pharmacokinetic/pharmacodynamic (PK/PD) studies are an essential component of pre-clinical drug discovery. Current best approaches for PK/PD studies, including the analysis of novel kidney disease targeting therapeutic agents, are limited to animal models with unclear translatability to the human condition. To address this challenge, we developed a novel approach for PK/PD studies using transplanted human kidney organoids. We performed PK studies with GFB-887, an investigational new drug now in Phase 2 trials. Orally dosed GFB-887 to athymic rats that had undergone organoid transplantation resulted in measurable drug exposure in human transplanted organoids. Importantly, we established the efficacy of orally dosed GFB-887 in PD studies, where quantitative analysis showed significant protection of kidney filter cells in human organoids and endogenous rat host kidneys. This widely applicable approach demonstrates, for the first time, feasibility of using transplanted human organoids in PK/PD studies, empowering organoids to revolutionize drug discovery.
 
Overall design scRNAseq profiles of in vitro and in vivo matured IPSC derived organoids
 
Contributor(s) Fast E, Westerling-Bui AD, Mundel P
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Submission date Jan 19, 2021
Last update date Jun 16, 2022
Contact name Eva Fast
E-mail(s) eva.fast@pfizer.com, evaisfast@gmail.com
Organization name Pfizer
Street address 1 Portland st
City Cambridge
State/province MA
ZIP/Postal code 02139
Country USA
 
Platforms (2)
GPL16791 Illumina HiSeq 2500 (Homo sapiens)
GPL27025 Illumina HiSeq 2500 (Homo sapiens; Rattus norvegicus)
Samples (42)
GSM5026212 organoid_d0_scRNAseq_1
GSM5026213 organoid_d0_scRNAseq_2
GSM5026214 organoid_d0_scRNAseq_3
Relations
BioProject PRJNA693268
SRA SRP302368

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE165104_RAW.tar 3.6 Gb (http)(custom) TAR (of MTX, TSV)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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