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| Status |
Public on Jun 13, 2009 |
| Title |
Human Erythroid Day 10 ChIP using GATA, PolII, H3 and H4 |
| Organism |
Homo sapiens |
| Experiment type |
Genome binding/occupancy profiling by genome tiling array
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| Summary |
A large-scale analysis of histone acetylation as well as RNA polymerase II and GATA 1 interactions on chromosome 6q in human erythroid progenitor cells.
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| Overall design |
Human erythroid progenitors from day 10 erythroid cultures were used for ChIP-chip analysis. For this purpose, the NimbleGen array system was used, following manufacturer's protocols. Samples for ChIP were taken from the same individual and processed for use with each of the following antibodies: GATA1, PolII, AcH3 and AcH4.
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| Contributor(s) |
Wahlberg K, Jiang J, Rooks H, Jawaid K, Matsuda F, Yamaguchi M, Lathrop M, Thein S, Best S |
| Citation(s) |
19528534 |
| Submission date |
Jun 10, 2009 |
| Last update date |
Mar 21, 2012 |
| Contact name |
Steve Best |
| E-mail(s) |
steve.best@kcl.ac.uk
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| Organization name |
King's College London
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| Department |
The James Black Centre
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| Lab |
Molecular Haematology
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| Street address |
125 Coldharbour Lane
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| City |
London |
| ZIP/Postal code |
SE5 9NU |
| Country |
United Kingdom |
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| Platforms (1) |
| GPL8694 |
NimbleGen Homo sapiens 384K hg18 tiling set 16 |
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| Samples (4)
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| Relations |
| BioProject |
PRJNA116167 |
| Supplementary file |
Size |
Download |
File type/resource |
| GSE16541_RAW.tar |
71.5 Mb |
(http)(custom) |
TAR (of TXT) |
| Processed data included within Sample table |
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