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Series GSE165583 Query DataSets for GSE165583
Status Public on Jan 27, 2021
Title The Xa7 Resistance Gene Guards the Susceptibility Gene SWEET14 of Rice Against Exploitation by Bacterial Blight Pathogen
Organism Oryza sativa
Experiment type Other
Summary TAL effectors of bacteria hijack host gene expression to condition disease susceptibility, while host plants counteract TAL effectors with resistance genes to thwart pathogen infections. Here we report the cloning of Xa7, TAL effector-specific expression by the essential virulence TAL effectors AvrXa7 and PthXo3, and the prevalence of Xa7 in indica rice cultivars.
 
Overall design RAMPAGE in Xoo treated- and untreated O. sativa IRBB7.
 
Contributor(s) Raborn RT, Brendel VP, Yang B
Citation Luo et al. The Xa7 resistance gene guards the rice susceptibility gene SWEET14 against exploitation by the bacterial blight pathogen. Plant Communications. 19 January 2021, 100164.
Submission date Jan 26, 2021
Last update date Apr 29, 2021
Contact name R. Taylor Raborn
E-mail(s) rtraborn@asu.edu
Organization name Arizona State University
Department Center for Mechanisms of Evolution
Lab Lynch
Street address 727 E Tyler St
City Tempe
State/province AZ
ZIP/Postal code 85283
Country USA
 
Platforms (1)
GPL21087 Illumina NextSeq 500 (Oryza sativa)
Samples (5)
GSM5044363 RAMPAGE_IRBB7_Control_1
GSM5044364 RAMPAGE_IRBB7_Control_2
GSM5044365 RAMPAGE_IRBB7_Treated_1
Relations
BioProject PRJNA695000
SRA SRP303369

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE165583_RAW.tar 6.9 Mb (http)(custom) TAR (of TAB, TXT)
GSE165583_TSRsetCombined.tab.gz 248.5 Kb (ftp)(http) TAB
GSE165583_TSRsetCombined.txt.gz 409.0 Kb (ftp)(http) TXT
GSE165583_TSRsetMerged-1.tab.gz 113.4 Kb (ftp)(http) TAB
GSE165583_TSRsetMerged-1.txt.gz 126.7 Kb (ftp)(http) TXT
GSE165583_TSRsetMerged-2.tab.gz 242.0 Kb (ftp)(http) TAB
GSE165583_TSRsetMerged-2.txt.gz 263.2 Kb (ftp)(http) TXT
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file
Processed data are available on Series record

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