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Series GSE165643 Query DataSets for GSE165643
Status Public on Apr 13, 2022
Title Microarray timecourse profiling of gene expression changes in primary human monocytes and B-cells cultured at high density to investigate FcgR2b associated gene expression changes
Organism Homo sapiens
Experiment type Expression profiling by array
Summary Whole-genome microarray gene expression profiling of primary human monocytes and B-cells cultured at high density. Monocytes and B-cells were isolated from PMBCs of 2 healthy donors and cultured at 1x10^7 cells/mL (high density). Samples were harvested for microarray gene expresssion profiling at 0, 2, 10 or 24hrs (monocytes) or 0 or 24hrs (B-cells). Protein expression of FcgR2b is higher on monocytes in high density conditions compared to low density (1x10^6 cells/mL) conditions where expression is negligble. This study provides information on genome-wide gene expression changes that occur in high density culture in order to study associations with FcgR2b expression. B-cells cultured at high density and low density show similar levels of moderate FcgR2b expression. B cells at 0hr and after 24hr of high density culture are included in this dataset as a comparators.
 
Overall design Microarray timecourse profiling of primary human monocytes and B-cells cultured at high density for 24hr.
 
Contributor(s) Smith RC, Thirdborough SM, Hussain K, Cragg MS
Citation(s) 35392965
Submission date Jan 27, 2021
Last update date Apr 19, 2022
Contact name Rosanna C G Smith
E-mail(s) r.c.smith@soton.ac.uk
Organization name University of Southampton
Department Cancer Sciences Unit, Faculty of Medicine
Lab Antibody and Vaccine Group
Street address Centre for Cancer Immunology, University Hospital Southampton (MP 127), Tremona Road
City Southampton
State/province Hampshire
ZIP/Postal code SO16 6YD
Country United Kingdom
 
Platforms (1)
GPL13938 Illumina HumanHT-12 WG-DASL V4.0 expression beadchip
Samples (12)
GSM5047320 D1B0: Bcell_Donor1_0hr
GSM5047321 D1B24: Bcell_Donor1_HD_24hr
GSM5047322 D1M0: Monocytes_Donor1_0hr
Relations
BioProject PRJNA695262

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE165643_Controls_matrix_non-normalized.xlsx 82.3 Kb (ftp)(http) XLSX
GSE165643_Normalized_matrix.xlsx 5.0 Mb (ftp)(http) XLSX
GSE165643_Probes_matrix_non-normalized.xlsx 4.8 Mb (ftp)(http) XLSX
GSE165643_RAW.tar 10.7 Mb (http)(custom) TAR
Processed data included within Sample table
Processed data are available on Series record

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