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Series GSE165709 Query DataSets for GSE165709
Status Public on Sep 03, 2021
Title Epigenetic impairment and blunted transcriptional response to Mycobacterium tuberculosis of alveolar macrophages from persons living with HIV
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Genome binding/occupancy profiling by high throughput sequencing
Summary This SuperSeries is composed of the SubSeries listed below.
 
Overall design Refer to individual Series
 
Citation(s) 34473646
Submission date Jan 28, 2021
Last update date Sep 03, 2021
Contact name Erwin Schurr
E-mail(s) erwin.schurr@mcgill.ca
Organization name McGill University Health Centre
Street address 1001 boulevard Decarie
City Montreal
ZIP/Postal code H4A 3J1
Country Canada
 
Platforms (2)
GPL20301 Illumina HiSeq 4000 (Homo sapiens)
GPL24676 Illumina NovaSeq 6000 (Homo sapiens)
Samples (212)
GSM5048424 ATAC-Seq Healthy control sample 2, Alveolar macrophage, Mycobacterium tuberculosis non-challenged library
GSM5048425 ATAC-Seq Healthy control sample 2, Alveolar macrophage, Mycobacterium tuberculosis challenged library
GSM5048426 ATAC-Seq Healthy control sample 7, Alveolar macrophage, Mycobacterium tuberculosis non-challenged library
This SuperSeries is composed of the following SubSeries:
GSE165703 Epigenetic impairment and blunted transcriptional response to Mycobacterium tuberculosis of alveolar macrophages from persons living with HIV (ATAC-Seq)
GSE165705 Epigenetic impairment and blunted transcriptional response to Mycobacterium tuberculosis of alveolar macrophages from persons living with HIV (ChIP-Seq)
GSE165708 Epigenetic impairment and blunted transcriptional response to Mycobacterium tuberculosis of alveolar macrophages from persons living with HIV (RNA-Seq)
Relations
BioProject PRJNA695508

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
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Supplementary data files not provided
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