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Series GSE16600 Query DataSets for GSE16600
Status Public on Jul 10, 2009
Title Tumor T3 Sectors
Organism Homo sapiens
Experiment type Genome variation profiling by genome tiling array
Summary The following CGH experiments were conducted on four sectors (S1-S4) from a single primary ductal carcinoma tumor (T3).
 
Overall design The genomic DNA from each tumor sector was labeled with Cy5 and hybridized to an 85K Bgl2 ROMA Microarray. A normal reference male fibroblast was labeled with Cy3 as a control. Samples were dye-swapped and the experiments were conducted in color-reversal. The value data repesents a log ratio of the mean of two dye-swapped samples


 
Citation(s) 19846608, 19903760
Submission date Jun 14, 2009
Last update date Mar 21, 2012
Contact name Nicholas Navin
Organization name Cold Spring Harbor Laboratory
Lab Wigler Lab
Street address 1 Bungtown Road
City Cold Spring Harbor
State/province NY
ZIP/Postal code 11724
Country USA
 
Platforms (1)
GPL8581 85KV4 ROMA Custom Human Microarray (Format 28)
Samples (4)
GSM413234 NN501 (T3S1)
GSM413235 NN502 (T3S2)
GSM413236 NN522 (T3S3)
This SubSeries is part of SuperSeries:
GSE16672 All Tumor Sector Experiments (T1-T20)
Relations
BioProject PRJNA122771

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE16600_RAW.tar 118.4 Mb (http)(custom) TAR (of GPR)
Processed data included within Sample table

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