|
| Status |
Public on Jul 10, 2009 |
| Title |
Tumor T20 Sectors |
| Organism |
Homo sapiens |
| Experiment type |
Genome variation profiling by genome tiling array
|
| Summary |
The following CGH experiments were conducted on four sectors (S1-S4) from a single primary ductal carcinoma tumor (T20) using the Sector-Ploidy-Profiling (SPP) Approach. SPP involves macro-dissecting the tumor, flow-sorting nuclei by differences in total genomic DNA content and profiling the genome of the tumor subpopulations.
|
| |
|
| Overall design |
The genomic DNA from each tumor subpopulation was labeled with Cy5 and hybridized to an 390K Rubble-Rep ROMA Microarray. A normal reference male fibroblast was labeled with Cy3 as a control. Samples were cohybridize to the same single microarray.
|
| |
|
| Citation(s) |
19846608, 19903760 |
| |
| Submission date |
Jun 17, 2009 |
| Last update date |
Mar 21, 2012 |
| Contact name |
Nicholas Navin |
| Organization name |
Cold Spring Harbor Laboratory
|
| Lab |
Wigler Lab
|
| Street address |
1 Bungtown Road
|
| City |
Cold Spring Harbor |
| State/province |
NY |
| ZIP/Postal code |
11724 |
| Country |
USA |
| |
|
| Platforms (1) |
| GPL8720 |
ROMA 390K Rubble Rep Human Microarray (Design 36) |
|
| Samples (4)
|
|
| This SubSeries is part of SuperSeries: |
| GSE16672 |
All Tumor Sector Experiments (T1-T20) |
|
| Relations |
| BioProject |
PRJNA122709 |
Less...
More...