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Series GSE168299 Query DataSets for GSE168299
Status Public on Nov 19, 2021
Title Cell-Specific Transcriptome of the COPD Alveolar Niche
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary The study aimed to compare the gene expression profiles at a single cell level in lung tissues between patients with COPD and donor controls.
 
Overall design Single-cell RNA sequencing data was generated from lungs of 4 cigarette smoke exposed and 4 room air exposed mice.
 
Contributor(s) McDonough J, Sauler M, Schupp J, Kaminski N, Rosas I
Citation(s) 35078977
Submission date Mar 04, 2021
Last update date Mar 20, 2022
Contact name John McDonough
Organization name Yale School of Medicine
Street address 300 Cedar St
City New Haven
State/province CT
ZIP/Postal code 06519
Country USA
 
Platforms (1)
GPL21103 Illumina HiSeq 4000 (Mus musculus)
Samples (8)
GSM5136206 C2
GSM5136207 C5
GSM5136208 D2
Relations
BioProject PRJNA706773
SRA SRP309380

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE168299_Processed_meta_data.csv.gz 1.4 Mb (ftp)(http) CSV
GSE168299_Raw_gene_counts_matrix.mtx.gz 787.2 Mb (ftp)(http) MTX
GSE168299_barcodes.csv.gz 278.4 Kb (ftp)(http) CSV
GSE168299_features.csv.gz 198.1 Kb (ftp)(http) CSV
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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