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Series GSE16874 Query DataSets for GSE16874
Status Public on Dec 07, 2010
Title Expression in wild type and TgDREAM mouse B cells unstimulated or 2 days after LPS+IL4 stimulation
Organism Mus musculus
Experiment type Expression profiling by array
Summary DREAM/KChIP-3 is a calcium-dependent transcriptional repressor highly expressed in immune cells. Transgenic mice expressing a dominant active DREAM mutant show reduced serum immunoglobulin levels. In vitro assays show that reduced immunoglobulin secretion is an intrinsic defect of transgenic B cells that occurs without impairment in plasma cell differentiation but with an accelerated entry in cell division and an increase in class switch recombination. B cells from DREAM knockout mice did not show any phenotype, due to compensation by endogenous KChIP-2. Expression arrays revealed modified expression of Edem1 and Derlin3, two proteins related to the ER-associated degradation pathway and of Klf9, a cell-cycle regulator. Our results disclose a function of DREAM and KChIP-2 in Ig subclass production in B lymphocytes.
 
Overall design We used Affymetrix microarrays (GeneChip Mouse Genome 430 2.0) to compare global gene expression in wild type (WT) versus transgenic B cells (Tg), unstimulated and 2 days after LPS + IL4 stimulation. For ech type of sample three hybridizations were carried-out (independent biological replicates).
 
Contributor(s) Savignac M, Mellström B, Bébin A, Oliveros JC, Delpy L, Pinaud E, Naranjo JR
Citation(s) 21059893
Submission date Jun 29, 2009
Last update date Feb 11, 2019
Contact name Juan Carlos Oliveros
Organization name CNB, CSIC
Street address Darwin 3
City Cantoblanco
State/province Madrid
ZIP/Postal code 28049
Country Spain
 
Platforms (1)
GPL1261 [Mouse430_2] Affymetrix Mouse Genome 430 2.0 Array
Samples (12)
GSM422913 BCells_WildType_day0_REP1
GSM422914 BCells_WildType_day0_REP2
GSM422915 BCells_WildType_day0_REP3
Relations
BioProject PRJNA117581

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Supplementary file Size Download File type/resource
GSE16874_RAW.tar 43.4 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table

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