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Series GSE168787 Query DataSets for GSE168787
Status Public on Mar 01, 2023
Title Transcriptomic evaluation of age-associated CNS-resident CD8 memory T cells identifies CD200R1 as an important regulator of T cell entry and activation
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary We report a novel role for the CD200-CD200R1 pathway in regulating the basal entry and activation of resident memory phenotype CD8 T cells in the brain and other non-lymphoid tissues.
 
Overall design Brain and spleen CD8 T cells (CD44HiCD62LLo) were isolated by FACS, Cells were stimulated with or without PMA/ionomycin for 2 hours to were subjected to RNA-sequecing
 
Contributor(s) Ritzel RM, Roy-O’Reilly M, Yang HS, Howell GR, McCullough LD
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Submission date Mar 12, 2021
Last update date Mar 04, 2023
Contact name Gareth Howell
E-mail(s) gareth.howell@jax.org
Organization name The Jackson Laboratory
Street address 600 Main St
City Bar Harbor
State/province ME
ZIP/Postal code 04609
Country USA
 
Platforms (1)
GPL21626 NextSeq 550 (Mus musculus)
Samples (35)
GSM5169492 AgedFemale-Brain-NoStim-13_S10
GSM5169493 AgedFemale-Brain-NoStim-14_S1
GSM5169494 AgedFemale-Brain-NoStim-15_S6
Relations
BioProject PRJNA713988
SRA SRP310392

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE168787_RAW.tar 41.5 Mb (http)(custom) TAR (of TXT)
GSE168787_Z_raw_counts.txt.gz 764.7 Kb (ftp)(http) TXT
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record
Processed data provided as supplementary file

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