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| Status |
Public on Oct 31, 2009 |
| Title |
Effect of AtHRE1 and AtHRE2 overexpression in normoxia and hypoxia |
| Organism |
Arabidopsis thaliana |
| Experiment type |
Expression profiling by array
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| Summary |
HRE1 and HRE2 are two ERF transcription factors induced by low oxygen. In this work we analyzed the effect of ectopic expression of HRE1 and HRE2 on the arabidopsis transcriptome in aerobic and hypoxic (1% O2) conditions. While HRE1 has a moderate effect on the expression of anaerobic genes under hypoxia, HRE2 does not affect them either under aerobic or hypoxic conditions.
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| Overall design |
We treated Arabidopsis seedling Col-0 (wt) and transgenic 35S::HRE1 and 35S::HRE2 , 7-day old, germinated in 12/12 light/dark photoperiod with:
-Control (23°C, dark, 21% O2, 4h).
-Hypoxia (23°C, dark, 1% O2, 4h).
Two biological replicates for each condition.
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| Contributor(s) |
Licausi F, van Dongen JT, Giuntoli B, Novi G, Antonietta S, Geigenberger P, Perata P |
| Citation(s) |
20113439 |
| Submission date |
Jul 15, 2009 |
| Last update date |
Aug 15, 2018 |
| Contact name |
Pierdomenico Perata |
| E-mail(s) |
p.perata@sssup.it
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| Phone |
+39050881901
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| Organization name |
Sant'Anna School of Advanced Studies
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| Department |
Institute of Life Sciences
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| Lab |
PlantLab
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| Street address |
Via Guidiccioni 8-10
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| City |
San Giuliano Terme |
| State/province |
Pisa |
| ZIP/Postal code |
56010 |
| Country |
Italy |
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| Platforms (1) |
| GPL198 |
[ATH1-121501] Affymetrix Arabidopsis ATH1 Genome Array |
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| Samples (12)
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| Relations |
| Affiliated with |
GSE69995 |
| BioProject |
PRJNA117819 |
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