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Series GSE171210 Query DataSets for GSE171210
Status Public on Apr 12, 2021
Title Gastruloids generated without exogenous Wnt activation develop anterior neural tissues [EmbryoidsTruseq2]
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Here we describe an approach to generate gastruloids that have a more complete antero-posterior development. We used bioengineered hydrogel microwell arrays to promote the robust derivation of mouse ESCs into post-implantation epiblast-like (EPI) aggregates in a reproducible and scalable manner. These EPI aggregates break symmetry and axially elongate without external chemical stimulation. Inhibition of WNT signaling in early stages of development leads to the formation of gastruloids with anterior neural tissues.
 
Overall design Testing the effect of XAV939 on the development of mouse epiblast-like aggregates.
 
Contributor(s) Girgin MU, Broguiere N, Mattolini L, Lutolf MP
Citation(s) 33891872
Submission date Mar 31, 2021
Last update date Jun 28, 2021
Contact name Nicolas Broguiere
E-mail(s) nicolas.broguiere@epfl.ch
Organization name EPFL
Department Sciences de la vie
Lab Laboratory of Stem Cell Bioengineering
Street address AI 1208 Station 15
City Lausanne
ZIP/Postal code 1015
Country Switzerland
 
Platforms (1)
GPL21103 Illumina HiSeq 4000 (Mus musculus)
Samples (40)
GSM5220864 D3_no_matrigel_1
GSM5220865 D3_XAV_1
GSM5220866 D4_no_matrigel_1
Relations
BioProject PRJNA718749
SRA SRP312864

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE171210_CountMatrix_truseq2.tsv.gz 1.5 Mb (ftp)(http) TSV
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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