|
| Status |
Public on Dec 18, 2022 |
| Title |
HCMV epigenome during early lytic infection |
| Organisms |
Homo sapiens; Human betaherpesvirus 5 |
| Experiment type |
Genome binding/occupancy profiling by high throughput sequencing
|
| Summary |
Purpose: to investigate occupancy of Pol II and H3K27Ac on the HCMV and cellular genomes at early times post-infection in a lytic model
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| |
|
| Overall design |
MRC5 cells were infected with the TB40/E wtGFP strain of HCMV. Cells were left in culture for 24 hours, and then processed for Pol 2 and H3K27Ac ChIPseq analysis.
|
| |
|
| Contributor(s) |
Hummel M, Forte E, Schipma M |
| Citation(s) |
36645269 |
| NIH grant(s) |
| Grant ID |
Grant title |
Affiliation |
Name |
| P01 AI112522 |
Integrating Mechanistic Insights from Diverse Models to Prevent CMV Reactivation following Transplantation |
NORTHWESTERN UNIVERSITY AT CHICAGO |
MARY A HUMMEL |
|
| |
| Submission date |
Apr 05, 2021 |
| Last update date |
Jan 17, 2023 |
| Contact name |
Mary Hummel |
| E-mail(s) |
m-hummel@northwestern.edu
|
| Phone |
847-322-6438
|
| Organization name |
Northwestern University
|
| Street address |
303 E. Chicago Ave
|
| City |
Chicago |
| State/province |
IL |
| ZIP/Postal code |
60611 |
| Country |
USA |
| |
|
| Platforms (1) |
| GPL29977 |
Illumina NovaSeq 6000 (Homo sapiens; Human betaherpesvirus 5) |
|
| Samples (8)
|
|
| This SubSeries is part of SuperSeries: |
| GSE171522 |
HCMV epigenome and transcriptome during early lytic infection |
|
| Relations |
| BioProject |
PRJNA719827 |
| SRA |
SRP313550 |
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