|
| Status |
Public on Apr 07, 2021 |
| Title |
Low-dose DNA demethylating therapy induces reprogramming of diverse cancer-related pathways at the single-cell level |
| Organism |
Homo sapiens |
| Experiment type |
Methylation profiling by genome tiling array
Expression profiling by high throughput sequencing
|
| Summary |
This SuperSeries is composed of the SubSeries listed below.
|
| |
|
| Overall design |
Refer to individual Series
|
| |
|
| Citation(s) |
32958049 |
| |
| Submission date |
Apr 07, 2021 |
| Last update date |
Jul 12, 2021 |
| Contact name |
Hideyuki Takeshima |
| E-mail(s) |
takeshima.hideyuki@hoshi.ac.jp
|
| Organization name |
Hoshi University
|
| Department |
Institute for Advanced Life Sciences
|
| Lab |
Department of Epigenomics
|
| Street address |
2-4-41 Ebara
|
| City |
Shinagawa-ku |
| State/province |
Tokyo |
| ZIP/Postal code |
142-8501 |
| Country |
Japan |
| |
|
| Platforms (2) |
| GPL13534 |
Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482) |
| GPL20301 |
Illumina HiSeq 4000 (Homo sapiens) |
|
| Samples (13)
|
| GSM4494968 |
DNA methylation in mock-treated bulk HCT116 cells |
| GSM4494969 |
DNA methylation in decitabine-treated bulk HCT116 cells |
| GSM4494970 |
DNA methylation in clone H3-01 |
|
| This SuperSeries is composed of the following SubSeries: |
| GSE149255 |
DNA methylation analysis of cloned HCT116 cells treated with a DNA demethylating drug. |
| GSE171429 |
scRNA-seq of DAC-treated and mock-treated HCT116. |
|
| Relations |
| BioProject |
PRJNA720322 |
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