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| Status |
Public on Apr 30, 2022 |
| Title |
Transcriptome profiling of the intramuscular fat content in Longissimus dorsi between Angus and Chinese Simmental cattle |
| Organism |
Bos taurus |
| Experiment type |
Expression profiling by high throughput sequencing
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| Summary |
The intramuscular fat (IMF) content of different beef cattle breeds varies greatly, which plays an important role in taste and nutritional value. However, the molecular mechanism of fat metabolism and deposition in beef cattle is still not very clear. In this study, the meat quality traits of Angus cattle and Chinese Simmental cattle were compared, the transcriptome of the longissimus dorsi muscle (LD) between Angus cattle and Chinese Simmental cattle was then analyzed to identify key genes related to fat metabolism and adipogenesis by high-throughput RNA-seq technology. In the current study conducted a comprehensive analysis on the transcriptome of the longissimus dorsi muscle (LD) of Angus and Simmental cattle, and identified differentially expressed genes related to lipid metabolism，which may have a great impact on on the formation of IMF.
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| Overall design |
RNAseq profiles of Angus and Chinese Simmental longissimus dorsi (LD)
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| Contributor(s) |
Zheng Y, Yu Q, Han L, Gao Y, Yang Y |
| Citation missing |
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| Submission date |
Apr 12, 2021 |
| Last update date |
Apr 30, 2022 |
| Contact name |
Ya zheng |
| E-mail(s) |
kuroro1986@126.com
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| Organization name |
Gansu Agricultural University
|
| Street address |
No. 1, Yingmen Village, Anning District
|
| City |
Lanzhou |
| ZIP/Postal code |
730070 |
| Country |
China |
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| Platforms (1) |
| GPL26012 |
Illumina NovaSeq 6000 (Bos taurus) |
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| Samples (6)
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| Relations |
| BioProject |
PRJNA721312 |
| SRA |
SRP314437 |
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