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Series GSE172191 Query DataSets for GSE172191
Status Public on Dec 01, 2021
Title Intratumor genomic heterogeneity in stage II colon cancer
Organism Homo sapiens
Experiment type Genome variation profiling by SNP array
Other
Summary This SuperSeries is composed of the SubSeries listed below.
 
Overall design Refer to individual Series
 
Citation(s) 35066875
Submission date Apr 16, 2021
Last update date Jan 11, 2023
Contact name Sara Lahoz
E-mail(s) saralahoz93@gmail.com, salahoz@clinic.cat
Organization name Institut D'Investigacions Sanitàries August Pi i Sunyer
Street address Carrer del Rosselló, 149
City Barcelona
ZIP/Postal code 08036
Country Spain
 
Platforms (2)
GPL15520 Illumina MiSeq (Homo sapiens)
GPL21558 [OncoScan_CNV] Affymetrix OncoScan CNV FFPE Assay
Samples (128)
GSM5233988 T01: Colon tumor from patient 01
GSM5233989 T02: Colon tumor from patient 02
GSM5233990 T03: Colon tumor from patient 03
This SuperSeries is composed of the following SubSeries:
GSE171777 Affymetrix OncoScan SNP arrays for profiling copy-number alterations (CNAs) and loss-of-heterozygosity (LOH) in colon cancer
GSE172190 Targeted Next-Generation Sequencing for profiling frequently mutated genes in early-stage colon cancer
Relations
BioProject PRJNA722394

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE172191_RAW.tar 2.0 Gb (http)(custom) TAR (of CEL, OSCHP, VCF)
SRA Run SelectorHelp

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