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Status |
Public on Aug 31, 2009 |
Title |
Rapid Identification of Bacterial Pathogens using a PCR- and Microarray-Based Assay |
Platform organisms |
Acinetobacter baumannii; Neisseria meningitidis; Klebsiella pneumoniae; Haemophilus influenzae; Staphylococcus aureus; Staphylococcus epidermidis; Streptococcus agalactiae; Streptococcus pneumoniae; Streptococcus pyogenes; Enterococcus faecalis; Enterococcus faecium; Listeria monocytogenes |
Sample organisms |
Homo sapiens; unidentified |
Experiment type |
Other
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Summary |
A method based on a modified broad-range PCR and an oligonucleotide microarray for the simultaneous detection and identification of 12 bacterial pathogens at the species level.
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Overall design |
The feasibility of this assay in routine diagnostic testing was evaluated using 146 blood culture positive and 40 blood culture negative samples. The processed data are composed of ORGANISM NAME or NEGATIVE answer depending if the pathogen is detected in the sample or not. See supplementary file linked below.
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Contributor(s) |
Jarvinen A, Maki M |
Citation(s) |
19664269 |
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Submission date |
Jul 21, 2009 |
Last update date |
Mar 21, 2012 |
Contact name |
Anna-Kaarina Jarvinen |
Organization name |
Mobidiag
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Street address |
Biomedicum Helsinki 2U, Tukholmankatu 8
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City |
Helsinki |
ZIP/Postal code |
FIN-00290 |
Country |
Finland |
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Platforms (1) |
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Samples (195)
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Relations |
BioProject |
PRJNA119185 |