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| Status |
Public on Jul 16, 2010 |
| Title |
RIMD 2210633 wild type versus vtrA or vtrB mutants |
| Platform organism |
Vibrio parahaemolyticus RIMD 2210633 |
| Sample organism |
Vibrio parahaemolyticus |
| Experiment type |
Expression profiling by array
|
| Summary |
Vibrio parahaemolyticus is a Gram-negative marine bacterium. A limited population of the organisms causes acute gastroenteritis in humans. Vibrio parahaemolyticus wild type strain RIMD 2210633 compared with the mutants of VtrA and VtrB have a winged helix-turn-helix DNA binding motif that genes encoded on pathogenicity island loci, at OD600=1.0 in Luria-Bertani containing medium 0.5 % NaCl at 37˚C. Our goal is to determine the VtrA or VtrB regulon.
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| Overall design |
Cohybridized wild type versus vtrA or vtrB mutants on a single array. Biological replicates: three of wild type, three of vtrA mutants and three of vtrB mutants were independently grown and harvested.
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| Contributor(s) |
Kodama T, Gotoh K, Iida T |
| Citation(s) |
20084267 |
| |
| Submission date |
Jul 21, 2009 |
| Last update date |
Aug 20, 2019 |
| Contact name |
Toshio Kodama |
| E-mail(s) |
kodama@biken.osaka-u.ac.jp
|
| Organization name |
OSAKA university
|
| Street address |
3-1 Yamadaoka
|
| City |
Suita |
| State/province |
Osaka |
| ZIP/Postal code |
565-0871 |
| Country |
Japan |
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| Platforms (1) |
| GPL6058 |
Vibrio parahaemolyticus RIMD2210633 5k microarray |
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| Samples (6)
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| Relations |
| BioProject |
PRJNA118947 |
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