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Status |
Public on Jul 16, 2010 |
Title |
RIMD 2210633 wild type versus vtrA or vtrB mutants |
Platform organism |
Vibrio parahaemolyticus RIMD 2210633 |
Sample organism |
Vibrio parahaemolyticus |
Experiment type |
Expression profiling by array
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Summary |
Vibrio parahaemolyticus is a Gram-negative marine bacterium. A limited population of the organisms causes acute gastroenteritis in humans. Vibrio parahaemolyticus wild type strain RIMD 2210633 compared with the mutants of VtrA and VtrB have a winged helix-turn-helix DNA binding motif that genes encoded on pathogenicity island loci, at OD600=1.0 in Luria-Bertani containing medium 0.5 % NaCl at 37˚C. Our goal is to determine the VtrA or VtrB regulon.
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Overall design |
Cohybridized wild type versus vtrA or vtrB mutants on a single array. Biological replicates: three of wild type, three of vtrA mutants and three of vtrB mutants were independently grown and harvested.
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Contributor(s) |
Kodama T, Gotoh K, Iida T |
Citation(s) |
20084267 |
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Submission date |
Jul 21, 2009 |
Last update date |
Aug 20, 2019 |
Contact name |
Toshio Kodama |
E-mail(s) |
kodama@biken.osaka-u.ac.jp
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Organization name |
OSAKA university
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Street address |
3-1 Yamadaoka
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City |
Suita |
State/province |
Osaka |
ZIP/Postal code |
565-0871 |
Country |
Japan |
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Platforms (1) |
GPL6058 |
Vibrio parahaemolyticus RIMD2210633 5k microarray |
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Samples (6)
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Relations |
BioProject |
PRJNA118947 |