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Series GSE173238 Query DataSets for GSE173238
Status Public on Apr 24, 2021
Title Mitochondrial dysfunction and immune response in pneumococcal pneumonia submitted to mechanical ventilation: impact of mesenchymal stem cells?
Organism Oryctolagus cuniculus
Experiment type Expression profiling by high throughput sequencing
Summary The goal of this study was to evaluate the impact of mechanical ventilation on immune and mitochondrial dysfunctions, in the setting of pneumococcal pneumonia in rabbits. Then, in a randomized trial, we assessed the effect of human umbilical cord-derived mesenchymal stem cells (MSCs), either alone, or in association with an atibiotic treatment (Ceftaroline) in the setting of pneumococcal pneumonia submitted to adverse mechanical ventilation. Pulmonary gene expression was analysed in an attempt to elucidate the effects of MSCs.
 
Overall design 4 comparisons were considered (n=7 rabbits/group) = 1) Healthy rabbits vs. Pneumonia+adverse mechanical ventilation (MV); and then in the setting of pneumococcal pneumonia + adverse MV: 2) treatment NaCl. Vs. MSCs; 3) NaCl. Vs. Ceftaroline; 4) Ceftaroline vs. Ceftaroline+MSCs
 
Contributor(s) Blot M, Charles P, Jacquier M
Citation missing Has this study been published? Please login to update or notify GEO.
Submission date Apr 23, 2021
Last update date Apr 25, 2021
Contact name Mathieu Blot
E-mail(s) mathieu.blot@chu-dijon.fr
Organization name INSERM UMR1231
Lab Lipness
Street address 7 bd Jeanne d'Arc
City DIJON
ZIP/Postal code 21000
Country France
 
Platforms (1)
GPL29005 NextSeq 550 (Oryctolagus cuniculus)
Samples (35)
GSM5264129 A3
GSM5264130 A4PD
GSM5264131 A5PD
Relations
BioProject PRJNA724740
SRA SRP316116

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SOFT formatted family file(s) SOFTHelp
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Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE173238_GrpA_vs_GrpB_DESeq_results_annotated.csv.gz 1.8 Mb (ftp)(http) CSV
GSE173238_GrpB_vs_GrpC_DESeq_results_annotated.csv.gz 1.8 Mb (ftp)(http) CSV
GSE173238_GrpB_vs_GrpD_DESeq_results_annotated.csv.gz 1.8 Mb (ftp)(http) CSV
GSE173238_GrpD_vs_GrpE_DESeq_results_annotated.csv.gz 1.9 Mb (ftp)(http) CSV
GSE173238_counts.tar.gz 10.7 Kb (ftp)(http) TAR
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Raw data are available in SRA
Processed data are available on Series record

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