|
Status |
Public on Apr 27, 2021 |
Title |
Next Generation Sequencing Facilitates Quantitative Analysis of CHAA Transcriptomes |
Organism |
Pseudoalteromonas sp. JSTW |
Experiment type |
Expression profiling by high throughput sequencing
|
Summary |
Purpose: Next-generation sequencing (NGS) has revolutionized systems-based analysis of cellular pathways. The goals of this study are to compare NGS-derived strain JSTW transcriptome profiling (RNA-seq) and to evaluate protocols for optimal high-throughput data analysis
|
|
|
Overall design |
mRNA profiles of JSTW strain were generated by deep sequencing, in triplicate.
|
|
|
Contributor(s) |
Zan S, Li Z |
Citation missing |
Has this study been published? Please login to update or notify GEO. |
|
Submission date |
Apr 26, 2021 |
Last update date |
May 01, 2021 |
Contact name |
Shuaijun Zan |
E-mail(s) |
zanxiafei@126.com
|
Organization name |
Dalian university and technology
|
Street address |
NO.2 of Linggong road
|
City |
Dalian |
ZIP/Postal code |
116024 |
Country |
China |
|
|
Platforms (1) |
GPL30042 |
Illumina NovaSeq 6000 (Pseudoalteromonas sp. JSTW) |
|
Samples (9)
|
|
Relations |
BioProject |
PRJNA725272 |
SRA |
SRP316444 |