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Series GSE175580 Query DataSets for GSE175580
Status Public on Jan 14, 2022
Title MAP2K2 Role in Acute Lung Injury
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary To determine how MEK2 may be driving altered inflammatory and repair processes in ALI, we analyzed lung tissue from wildtype and MEK2-knockout mice for gene expression using RNAseq during naïve state (day 0), and at days 2 and 4 post-infection.
 
Overall design Lung tissue from mice was analyzed before or following P. aeruginosa infection. Samples were collected at 3 time-points across 2 genotypes (n=5/group for n=30 samples total)
 
Contributor(s) Manicone A, Gharib S, Long M, Gong K
Citation missing Has this study been published? Please login to update or notify GEO.
Submission date May 26, 2021
Last update date Apr 25, 2024
Contact name Stephanie Osmond
E-mail(s) sosmond@benaroyaresearch.org
Organization name Benaroya Research Institute
Street address 1201 9th Ave
City Seattle,
State/province WA
ZIP/Postal code 98101
Country USA
 
Platforms (1)
GPL13112 Illumina HiSeq 2000 (Mus musculus)
Samples (30)
GSM5342061 1PAd2wt1
GSM5342062 2PAd2wt2
GSM5342063 3PAd2wt3
Relations
BioProject PRJNA732932
SRA SRP321493

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE175580_P393-1_RawGeneCounts.csv.gz 1.9 Mb (ftp)(http) CSV
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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