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Status |
Public on Apr 06, 2022 |
Title |
RNA-sequencing transcriptional profile of human hearts [HumanHeartFailure] |
Organism |
Homo sapiens |
Experiment type |
Expression profiling by high throughput sequencing
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Summary |
Organ fibroblasts are essential components of homeostatic and diseased tissues, as they participate in sensing the microenvironment and communicating with other resident cells. They are also involved in pathological remodeling and fibrosis, caused by excessive deposition of connective tissue after injury, which impairs organ function. It is estimated that 45% of deaths in developed countries are linked to chronic fibrosis, yet current drugs on the market are both inefficient and non-specific to this condition. We have previously shown that cardiac fibroblasts display a unique cardiogenic identity, important for cardiac pathological remodeling. To determine whether fibroblasts from other organ systems display a molecular signature unique to their organ of origin, we characterized fibroblasts isolated from the adult mouse skin, lung, kidney, gonad and liver, and documented a molecular positional and organ signature that is likely a remnant from embryonic development. This information opens novel opportunities for the treatment of fibrotic diseases in a more precise, organ-specific manner.
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Overall design |
RNA-sequencing transcriptional profile of human hearts, including heart failure and healthy control. Samples were obtained from n=5 healthy individuals and n=5 individuals with heart failure.
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Contributor(s) |
Forte E, Ramialison M, Nim HT, Furtado MB |
Citation(s) |
35293863 |
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Submission date |
May 28, 2021 |
Last update date |
Apr 06, 2022 |
Contact name |
Hieu Tri Nim |
E-mail(s) |
hieu.nim@monash.edu
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Phone |
0478367105
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Organization name |
Monash University
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Department |
Australian Regenerative Medicine Institute
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Street address |
Monash University Clayton Campus, Wellington Rd
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City |
Clayton |
State/province |
VIC |
ZIP/Postal code |
3800 |
Country |
Australia |
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Platforms (1) |
GPL18573 |
Illumina NextSeq 500 (Homo sapiens) |
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Samples (10)
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This SubSeries is part of SuperSeries: |
GSE175765 |
RNA-sequencing transcriptional profile of kidney capsule derived organ fibroblasts from adult mice, CRISPR-knockdown organ fibroblasts from adult mice, and human hearts |
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Relations |
BioProject |
PRJNA733500 |
SRA |
SRP321809 |