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Series GSE176275 Query DataSets for GSE176275
Status Public on Jun 08, 2021
Title Transcriptome profile of Haemaphysalis longicornis (Acari: Ixodidae) exposed to C. citratus essential oil and citronellal
Organism Haemaphysalis longicornis
Experiment type Expression profiling by high throughput sequencing
Summary Many genes responsive to C. citratus oil and citronellal were stress-related and they include genes associated with adrenergic signalling/calcium channels, cGMP-PKG signaling, apoptosis, focal adhesion, ECM-receptor interaction, ubiquitin mediated proteolysis, mTOR signalling pathway, and longevity regulating pathway.
 
Overall design Transcriptome profile of adult unfed ticks treated with three concentrations of C. citratus essential oil and citronellal
 
Contributor(s) Agwunobi DO, Yu Z, Liu J
Citation(s) 34802521
Submission date Jun 07, 2021
Last update date Dec 23, 2021
Contact name Desmond Onyeka Agwunobi
E-mail(s) desmondagwunobi247@gmail.com
Organization name Hebei Normal University
Street address No. 20 Road East 2nd Ring South Yuhua District
City Shijiazhuang
ZIP/Postal code 050024
Country China
 
Platforms (1)
GPL25900 Illumina HiSeq 2000 (Haemaphysalis longicornis)
Samples (21)
GSM5362028 HL_Ctrl1
GSM5362029 HL_Ctrl2
GSM5362030 HL_Ctrl3
Relations
BioProject PRJNA735703
SRA SRP323007

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE176275_ALL_annot.txt.gz 31.5 Mb (ftp)(http) TXT
GSE176275_DEG_union_for_cluster.txt.gz 557.3 Kb (ftp)(http) TXT
GSE176275_Sampled_cluster_all.fasta.gz 1.2 Kb (ftp)(http) FASTA
GSE176275_Sampled_trinity.fasta.gz 720 b (ftp)(http) FASTA
GSE176275_Sampled_unigene.fasta.gz 1.2 Kb (ftp)(http) FASTA
GSE176275_Trinity.fasta.gz 68.3 Mb (ftp)(http) FASTA
GSE176275_cluster_all.fasta.gz 43.8 Mb (ftp)(http) FASTA
GSE176275_data_quality_summary.txt.gz 743 b (ftp)(http) TXT
GSE176275_diff_sum.txt.gz 338 b (ftp)(http) TXT
GSE176275_unigene.fasta.gz 43.8 Mb (ftp)(http) FASTA
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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