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Series GSE176340 Query DataSets for GSE176340
Status Public on Jun 08, 2021
Title RNA-Seq of rabbits treated with normal diet or high cholesterol diet
Organism Oryctolagus cuniculus
Experiment type Expression profiling by high throughput sequencing
Summary We fed PGC1-alpha (mouse gene) transgenic rabbits and control rabits with normal diet or high cholesterol diet. Then we extract RNA from their vascular cells and performed RNA-Seq comapre the expression level of the mRNAs.
 
Overall design Non-transgenic rabbits fed with chow diet were served as the ctrl group, and transgenic or non-transgenic rabbits fed with high cholesterol diet for 20 weeks were the experimental groups. For each group, RNA from 5 rabbits were included and pooled together. The total RNA was then extracted and processed with RNA-Seq.
 
Contributor(s) Jiang X, Zhang C
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Submission date Jun 07, 2021
Last update date Jun 08, 2021
Contact name Xiaohong jiang
E-mail(s) xiaohongjiang@nju.edu.cn
Phone 86-025-89681280
Organization name Nanjing university
Lab 3M lab
Street address Xianlin Road
City Nanjing
State/province Jiangsu
ZIP/Postal code 210000
Country China
 
Platforms (1)
GPL18453 Illumina HiSeq 2000 (Oryctolagus cuniculus)
Samples (3)
GSM5363003 Ctrl rabbits fed Chow diet
GSM5363004 Ctrl rabbits fed High cholesterol diet
GSM5363005 Transgenic rabbits fed High cholesterol diet
Relations
BioProject PRJNA735787
SRA SRP323104

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Supplementary file Size Download File type/resource
GSE176340_gene.fpkm.diff-analyzed.anno.xlsx 3.4 Mb (ftp)(http) XLSX
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Raw data are available in SRA
Processed data are available on Series record

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