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Series GSE176485 Query DataSets for GSE176485
Status Public on Jun 26, 2024
Title Xenograft of bladder cancer cell line HT1376 were treated with or without EZH2 inhibitors before subject to RNA-seq
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary Advanced bladder cancer remains a difficult cancer to treat, and for the majority of patients, current standard treatments ultimately prove ineffective.  These tumors frequently harbor mutations in the BAF complex subunit ARID1A, which has been reported to confer sensitivity to EZH2 inhibition in several tumor types.  Here we describe the generation of CPI-0209, a best-in-class, orally available EZH2 inhibitor.  We show that mutant bladder cancer lines harboring ARID1A loss of function (LOF) mutations are preferentially sensitive to inhibition of EZH2. Treatment with CPI-0209 not only elicits a significant monotherapeutic response in ARID1A mutant models, it also outperforms cisplatin and improves response in chemo-resistant models. These findings shine light on new therapeutic opportunities for patients with advanced urothelial carcinoma.  
 
Overall design Xenograft of bladder cancer cell line HT1376 were treated with or without EZH2 inhibitors before subject to RNA-seq.
 
Contributor(s) Keller P, Adams E, Wu R, Trojer P
Citation(s) 38833522
Submission date Jun 09, 2021
Last update date Sep 26, 2024
Contact name Patrick Trojer
E-mail(s) patricktroj@gmail.com
Organization name Constellation Pharmaceuticals
Street address 215 First Street, Suite 200
City Cambridge
State/province Massachusetts
ZIP/Postal code 02142
Country USA
 
Platforms (1)
GPL20301 Illumina HiSeq 4000 (Homo sapiens)
Samples (21)
GSM5366277 veh_1
GSM5366278 veh_2
GSM5366279 veh_3
This SubSeries is part of SuperSeries:
GSE176493 Comprehensive target engagement by EZH2 inhibitor CPI-0209 allows for preferential targeting of ARID1A mutant urothelial carcinoma
Relations
BioProject PRJNA736421
SRA SRP323406

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE176485_RAW.tar 91.4 Mb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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