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Series GSE178556 Query DataSets for GSE178556
Status Public on Jun 22, 2021
Title Wdr5
Organism Mus musculus
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Expression profiling by high throughput sequencing
Summary This SuperSeries is composed of the SubSeries listed below.
 
Overall design Refer to individual Series
 
Citation(s)
  • Li Q, Mao F, Zhou B, Huang Y et al. p53 Integrates Temporal WDR5 Inputs during Neuroectoderm and Mesoderm Differentiation of Mouse Embryonic Stem Cells. Cell Rep 2020 Jan 14;30(2):465-480.e6. PMID: 31940490
  • Li Q, Huang Y, Xu J, Mao F et al. p53 inactivation unmasks histone methylation-independent WDR5 functions that drive self-renewal and differentiation of pluripotent stem cells. Stem Cell Reports 2021 Nov 9;16(11):2642-2658. PMID: 34715053
Submission date Jun 21, 2021
Last update date Dec 02, 2021
Contact name Rajesh C Rao
E-mail(s) rajeshr@umich.edu
Organization name University of Michigan
Street address 1000 Wall Street
City Ann Arbor
State/province Michigan
ZIP/Postal code 48105
Country USA
 
Platforms (1)
GPL24247 Illumina NovaSeq 6000 (Mus musculus)
Samples (43)
GSM5393707 ATAC-Seq DKOEV-rep1
GSM5393708 ATAC-Seq DKOEV-rep2
GSM5393709 ATAC-Seq DKOS91KY191F-rep1
This SuperSeries is composed of the following SubSeries:
GSE178551 Chromatin accessibility profiling of mouse embryonic stem cells and embryonic bodies using SFEBq differentiation methods upon Wdr5 and P53 deletion with or without WT or mutant hWDR5 rescue
GSE178552 Genome profiling of WDR5 and H3K4me3 binding in mouse embryonic stem cells
GSE178554 Genome profiling of MAX binding in mouse embryonic bodies using SFEBq differentiation methods
Relations
BioProject PRJNA739648

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE178556_RAW.tar 9.9 Gb (http)(custom) TAR (of BED, BIGWIG, BW, GTF, NARROWPEAK)
SRA Run SelectorHelp

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