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Series GSE178567 Query DataSets for GSE178567
Status Public on Jun 22, 2021
Title Changes in chromatin accessibility over time in cells expressing t(4;11) fusion proteins [I]
Organism Homo sapiens
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary We have used a constitutive MLL-AF4 fusion gene together with a inducible AF4-MLL fusion gene to investigate the power of theses fusion proteins. All transgenes were stably or transiently transfected.
 
Overall design Fusion genes were constructed by fusing distinct cDNA portions of MLL/KMT2A with corresponding AF4 fragment.
 
Contributor(s) Marschalek R
Citation(s) 34489550
Submission date Jun 21, 2021
Last update date Nov 03, 2021
Contact name Lukas Jost
E-mail(s) jost@genxpro.de
Organization name GenXPro GmbH
Street address Altenhöferallee 3
City Frankfurt am Main
ZIP/Postal code 60438
Country Germany
 
Platforms (1)
GPL18573 Illumina NextSeq 500 (Homo sapiens)
Samples (12)
GSM5393913 day0 BR1
GSM5393914 day0 BR2
GSM5393915 day0 BR3
This SubSeries is part of SuperSeries:
GSE178569 Changes in chromatin accessibility over time in cells expressing t(4;11) fusion proteins
Relations
BioProject PRJNA739668
SRA SRP324850

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE178567_raw_gene_count_matrix.tsv.gz 1.3 Mb (ftp)(http) TSV
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Raw data are available in SRA
Processed data are available on Series record

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